Zingiber officinale (ginger): 122030076
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Entry
122030076 CDS
T08725
Name
(RefSeq) long chain base biosynthesis protein 2a-like
KO
K00654
serine palmitoyltransferase [EC:
2.3.1.50
]
Organism
zof
Zingiber officinale (ginger)
Pathway
zof00600
Sphingolipid metabolism
zof01100
Metabolic pathways
Module
zof_M00094
Ceramide biosynthesis
zof_M00099
Sphingosine biosynthesis
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
122030076
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
zof01007
]
122030076
Enzymes [BR:
zof01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.50 serine C-palmitoyltransferase
122030076
Amino acid related enzymes [BR:
zof01007
]
Aminotransferase (transaminase)
Class II
122030076
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Aminotran_1_2
DegT_DnrJ_EryC1
Beta_elim_lyase
Aminotran_5
Myb_DNA-binding_2
OKR_DC_1
Motif
Other DBs
NCBI-GeneID:
122030076
NCBI-ProteinID:
XP_042445158
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Position
10B:6061675..6065892
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AA seq
508 aa
AA seq
DB search
MSPPLFLLLPPLPPIPPLAVPREIRRMVRLTFPTALLTLIGYGIFFAFGLLRDLFRKLLN
WSKSDDPKGYAPICPAFEDFYTRRIYHRIQDCFGRPIASAPDAWIDVVERYSNDNNKTLH
RTTNTTRCLNLGSYNYLGFAAGDEYCTPRVIESLESYAPTTCSSRADAGTTKLHTELEEL
IARFVGKPAAITFGMGYVTNSSIIPALVGEGGLIISDSFNHNSIVNGARASGATVMVFQH
NSPSQLEELLRKQIVKGQPGTGEPWKKIMVIVEGIYSMEGEFSKLPEIVAICKKYKAYIY
LDEAHSIGAVGKSGRGVCELLGVDPADVDIMMGTFTKSFGSCGGYIAASEDIIQYLRYAC
PAHLYATSMSPPAVQQVISAIKVVLGEDGSNRGAKKLAQIRESSNYFRSELKKTGFVVLG
DNDSPVMSIMLYNLAKLPAFSRECLRQNVAVVIVAYPATPVLLARARICISASHTREDLI
RGLKVISEVGDLVGAKCLPAEPEKIKFD
NT seq
1527 nt
NT seq
+upstream
nt +downstream
nt
atgtcgccgccgctgttcctcctactcccgccgctaccgcccattcccccactcgcggtg
ccgcgggagatccgccggatggtgaggctcactttcccgaccgccctcctcaccctcatc
ggctacggaatctttttcgctttcggtctcctccgcgacctcttccgcaagctcctcaac
tggtccaagtccgacgaccccaagggttatgcgcccatatgtccggcgttcgaggatttc
tacacccgtcgcatctaccaccgcatccaggattgttttggtcgcccaattgcgagtgca
ccggatgcttggatcgatgtggttgagcgttactccaatgacaataacaagactctacac
cgaactacaaacacaacaaggtgcctcaacctcggatcatacaactatcttggttttgca
gcaggagacgagtactgcacacctcgtgtgatcgaatctctcgagagttatgctcctact
acttgcagctctcgggcagatgcagggaccactaagttgcatactgaacttgaggagttg
atagcacgatttgtggggaaacctgcggctattacttttggcatgggatatgtgacaaac
tcttccataattcctgctttagttggagagggtggtctaatcattagtgattcattcaac
cataattccatcgtcaatggtgctcgagcttctggtgccacagttatggttttccaacac
aacagtccgtctcagttggaagaattgctgagaaagcagatagttaaggggcagcctggc
actggcgaaccatggaagaagataatggtcattgtggaaggaatatacagtatggaagga
gagttctctaagctgcctgagatagtagctatctgcaagaagtacaaggcatacatatat
ttggacgaggcacacagcataggcgctgttggaaaatctggcagaggtgtttgtgagctc
ctcggggtggatccagctgatgttgatatcatgatgggaacttttaccaagtcatttggg
tcctgtggaggctatattgcagcttcagaggatatcattcagtacctcaggtacgcttgc
ccagctcatctctatgccacgtccatgtcgccaccagcagttcaacaagtaatatctgca
atcaaggttgttcttggggaagatggatcaaacagaggagccaagaagcttgcacagatt
cgcgagagcagcaactacttccgatcagaacttaagaagacgggctttgtggttcttggc
gacaatgactcaccagtcatgtctattatgctatacaacttagctaaactccctgctttt
tctcgtgaatgcttaaggcagaatgttgcggttgtgattgtagcataccctgcaaccccg
gttttgcttgccagggccaggatctgcatatcagcttcccataccagggaagacctgata
agaggcttgaaggtcatcagcgaagttggtgatcttgtaggggcgaagtgcctccctgcc
gaaccagagaagataaagtttgattga
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