Zingiber officinale (ginger): 122030242
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Entry
122030242 CDS
T08725
Name
(RefSeq) RNA-binding protein 25-like isoform X1
KO
K12822
RNA-binding protein 25
Organism
zof
Zingiber officinale (ginger)
Pathway
zof03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
122030242
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
zof03041
]
122030242
Spliceosome [BR:
zof03041
]
Complex A
U1 snRNP components
U1 related factors
122030242
Complex B
122030242
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PWI
RRM_1
Motif
Other DBs
NCBI-GeneID:
122030242
NCBI-ProteinID:
XP_042445350
LinkDB
All DBs
Position
10B:complement(3925633..3932061)
Genome browser
AA seq
964 aa
AA seq
DB search
MAVTSPSSPRILDSNADAGNPPSSAVSDSSSITLPPAVSAPASVEPPASNPFNSIPNPAL
VAPPPPPPPAVHSFAPSFRPLAAPHVLQYSAANNPMAQNPAFLMGQAPGIHPPGVSAPAS
GMPPGAPPGSVPPLRPGVPYQVAPGQTPAPMSYAQVGNGYMAVPPQVPMAMPPPGMHRYP
APYQMIRPGFPLRHMPPTGVMPAVPRPPIPGIRGVPPVATPIVRPFIPVVAPVEKPQTTV
YVGKIAATIENEFLLSILTLCGPVKSWKRAQDPSDGTPKAFGFCEFESAEGVLRSLRLLS
KLNIDGQELMLNINQATREYLERYVEKKAEKEKQKEAETGTPPIEKDSREGSEIQEQPTK
PVEEGIKKDPEDSEEKENQVGNKKFGLVTDEDREADSDALGKLMGMIEERLKNRPLPPPV
LVDGSAKSTSDIPSKSRDVDSDVDIMKSDVEDKNDEDTTSENKPATESDKPETASPDRSR
RHDNRSRERDRERDLKREKERELERVERERERDKVRREREREMKLREAERLYKDRLKEWE
AREREKEYQRQYEKEREKERDRERWKDILRQEDESSDDDDDSRKRRRRTSLLEEKRRKRQ
REKEEDLEDKLKEKEEIAEAKRRAIEEQQLKLEVKQLKSDSKSLDRVAHEDENAMQEDEK
FERKPTLANHVNDIPRSGLNDADGISRNSSGDELNMMAPIAASDKKQNNNAPARKLGFGL
IGSGKRTTVPSVFHEEDDEDVDDKKMRPLVPIDYSTEELQAVQTNASGAQPNLVAAAEFA
KRISGVHPKDEKADVDRERSRRSSDKQNLREQGRNDDESSRSKDESKAKMHDRNTDRVKS
RGDKPKAENKKLLDAKQLIDMIPKTKEDLFVYEINWDVYDKHQLHERMRPWISKKITEFL
GEEEATLVDYIVSCIKDHVQASTMLEMLQSILDDESEMFVLKMWRMLIFEIKKVESGLSM
KSKS
NT seq
2895 nt
NT seq
+upstream
nt +downstream
nt
atggcggtcacctcgccttcctctccccgaatcctagactcaaacgccgacgctggcaac
ccaccgtcctccgccgtctccgattcgtcctccatcactcttcccccagccgtctctgct
cccgcttctgttgaaccccccgcctccaaccctttcaactcaatccctaatcctgcgcta
gtcgctcctcctcctcctcctcctccggccgtgcactctttcgctccgtctttccgcccc
ctggccgctcctcatgttcttcagtattccgctgcaaataacccgatggcacagaaccct
gcttttctgatggggcaagccccaggcatccatccgccgggcgtttctgcccctgcttcg
ggcatgcctcctggagcgcccccgggctcggttccgccgctacgacctggcgttccctat
caagttgctccaggccagactccagcgccgatgtcttatgctcaagttggaaatgggtat
atggctgtacctcctcaggttccgatggcgatgcctccaccgggaatgcaccgctatcca
gctccttaccagatgattcgccctggatttcctctgcgccatatgcccccaactggtgtg
atgccagcagtgccccggcctccaattccaggtattcggggtgtgccacctgtagccact
cctattgtccggccttttattccagttgttgcgccagtagagaagccacaaactactgtt
tatgttggcaagattgccgcgacaatagaaaatgaatttctcctttcaattctcacactt
tgtggacctgtaaaaagttggaaacgggctcaagatccttctgatggtacacctaaggcc
tttggattttgtgaatttgagtctgctgaaggagttcttcgttccttacgcttgctgagc
aaattaaacatagatggacaagaattgatgttgaacattaaccaagccactagggaatat
cttgagcgttatgttgaaaagaaagctgaaaaggagaagcagaaagaagcagaaactgga
actcctccaatcgaaaaggatagtagagaaggttctgaaatacaagagcagcctacaaag
ccagttgaagagggaattaaaaaggatcctgaagattctgaagaaaaagaaaaccaagtg
ggaaacaagaaatttggcctagtcacagatgaagaccgtgaggctgattcagatgctcta
ggaaagcttatgggaatgattgaagagagattaaagaacagaccattacctccacctgtg
cttgtcgatgggtctgctaaatctacttctgatataccttccaaatctagggatgtggat
tctgatgttgatataatgaaaagcgatgttgaagataaaaatgatgaggatactacaagt
gaaaacaaaccagcaactgaaagtgacaagcctgagactgcctcacctgatagatccagg
agacatgataataggagcagagaacgagatagggagcgtgatctgaaacgggaaaaagaa
agagagctagagagagttgagcgtgaacgagaaagagacaaagttaggagggaaagggaa
agggaaatgaaattaagggaggcagagcgattgtataaggaccgtcttaaagaatgggaa
gctagagagcgtgagaaagaataccagcgacaatatgaaaaggaacgggagaaagaaaga
gatcgggaacgatggaaagacatattgcgccaagaagatgaaagtagtgatgatgatgat
gactcgagaaaaagaaggcgtagaaccagtttactggaggaaaaaagaagaaagagacag
cgtgaaaaggaagaggatttggaagataaattgaaagaaaaggaagaaattgctgaagcc
aagaggagggcaatagaggaacagcaacttaaacttgaggtaaagcaactaaaatctgat
tcgaaatcacttgatcgggttgctcatgaggatgaaaatgctatgcaagaagatgagaaa
tttgaacgaaagccaactctggccaaccatgtcaatgatattcctagaagtggtcttaat
gatgcagatggcatttctagaaacagcagtggtgatgaactgaatatgatggctccaatt
gcagcttctgacaaaaagcagaacaataatgctccagcccgaaaacttggatttgggtta
attggctcaggaaaacgtacaactgtgccttcagtttttcacgaagaggatgatgaggat
gtggatgataaaaaaatgaggcctcttgtgccaattgattattcgactgaagaattacaa
gctgtccagacaaatgcatctggagcgcaaccaaatttggtggctgctgctgaatttgcc
aagcgcatatctggtgtccacccaaaagatgagaaggccgatgtagatagggaaaggagc
agacgttctagtgacaaacagaatttgagagaacaaggtcggaatgatgatgaaagcagc
cgttcaaaagatgaaagcaaggcaaagatgcatgataggaatacggatagggtaaaaagc
agaggagataaaccaaaagctgaaaacaagaaactattggatgccaagcaactgatcgat
atgattccaaaaacgaaggaagatctgtttgtctatgaaatcaattgggatgtttatgac
aagcatcaattgcatgagaggatgagaccttggatctcaaagaagattacagagttcctt
ggagaagaggaggccactttggttgactacattgtttcgtgtattaaagatcacgtgcaa
gcatcaacaatgctagaaatgcttcagtctatattggatgatgagtcagaaatgtttgtc
ctcaaaatgtggaggatgctgatttttgaaattaagaaagttgaatcaggcttatcaatg
aaatccaagtcctag
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