Zingiber officinale (ginger): 122030250
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Entry
122030250 CDS
T08725
Name
(RefSeq) TBC1 domain family member 5 homolog A-like isoform X1
KO
K18469
TBC1 domain family member 5
Organism
zof
Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
zof04131
]
122030250
Membrane trafficking [BR:
zof04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
122030250
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RabGAP-TBC
RabGap-TBC_2
Motif
Other DBs
NCBI-GeneID:
122030250
NCBI-ProteinID:
XP_042445365
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All DBs
Position
10B:complement(43762676..43769643)
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AA seq
806 aa
AA seq
DB search
MPPVSALDQTPSSSAHESSTVVRFSSLRGVRWRIDLGVLPSSSSSIVDLRRVAADSRRRY
ANLRRRLIVDPHLSKDDINSDLVKDNPLSQSPDSIWSRYFRNAEVEKMLDQDLSRLYPDQ
ESYFQTTTCQTMLRRILLLWCLIHPECGYRQGMHEQLAPLLYVLHVDLQYLSHVRGQYED
HFNDEFQGVSLPETDLSANYRFEKIMNRNIGTDGDNSSQGKTAKVRSLDELDPETKDIFF
MSDAYGAEGELGVILSEKFMEHDAYCMFDILMNDAHGVVAMAEFFSPSPSIGSSTGLPPI
IEAASAIYQLLATVDSSLHSHLVELGVEPQYFAMRWLRVLFGREFPLEDLLIMWDKIFSY
PNNKNFPHQANELEFRCRILCSPRGAFILAMAVSVLLHLRSSLLATDFATACLQRLLNIP
EDLNVKKLIEKAKSLQALALDLVFSSCSQGGTSRYNREGRRGHSLSYGSSPITPNQLSDS
YWEEKWRSMYASEELKKGNSTTTTSSDKKKEAVARKFSLSRTGSVPCPMEIPNKNGGPSD
EKTIVDSNTENDQSKYRCGIPSTSEVETESYFHGEQDDQNIKRKQSDVAGETCFSAENLS
TMTSPLRMVNDHEYDSDESSATSSSLVVDSYDEINHVEEPCSYIIDKEGITKCISESGHG
SGREETDAAPLKQQKPLAGRFQLFQKSNRGGCQGNLENGTAESKTSLLMQIVALFLFYKF
NHPRCNSFSVHERMKDEDKDINVTLRTIGKSMFDKIQIIELALKKDQIPENSGNSRSNAD
DLGQQQIAAFAALDELQKISNLLSEM
NT seq
2421 nt
NT seq
+upstream
nt +downstream
nt
atgccgcctgtctccgcattggatcaaacgccgtcgtcttctgcgcacgaatcgagcacc
gtcgtcagattctcaagccttcgcggagtacgatggcgcatcgatctcggcgtcctgccg
agttcttcttcttccatcgttgatctccggcgtgtcgctgcagattccaggaggagatat
gccaatctgagacgaaggcttatagtcgatcctcatctctcaaaggatgatatcaattct
gatcttgtcaaggacaatccattatcacaaagcccagatagcatttggagccgctatttt
aggaatgctgaagtggaaaagatgcttgatcaggatttgtcacggttgtatcctgatcag
gaaagttatttccagacaaccacatgccagactatgttgagacgaatacttcttttgtgg
tgccttattcatccagaatgcggatataggcaaggaatgcatgaacaactagctccactt
ttgtatgttcttcatgttgatctccagtacctttcacatgtacgtggacaatatgaagac
cacttcaatgatgaatttcaaggggtatctcttcctgaaactgacttgagtgccaactat
aggtttgagaaaatcatgaatcggaacataggaactgatggagataatagttcacaaggg
aaaactgccaaagtgagaagccttgatgagctagatcctgaaacaaaggacatttttttt
atgagcgatgcttatggagcagaaggagagttgggtgtcatcttatcagaaaaattcatg
gagcacgatgcctactgcatgtttgatattttaatgaatgatgcccatggtgtggttgcg
atggcagaattcttctctccttctccctccattgggtccagtacaggattgcctcccata
attgaagctgcctcagcaatttatcaactccttgctaccgttgattcatctcttcacagt
catctggttgagcttggtgtagagcctcagtactttgcaatgagatggctacgtgtttta
tttggacgagaatttccactagaggatcttttgataatgtgggacaaaatattctcttac
cctaacaataaaaattttccacatcaggcaaatgagctagaatttagatgcaggatattg
tgctcacctaggggagcatttatcctagcaatggctgtttctgttctacttcacctgaga
tcttcacttctagccactgattttgcaacagcttgtctccagaggttattaaatattcct
gaagacttaaatgtcaagaagttgatcgagaaagcaaagtcactgcaagctcttgctctg
gacttggttttctcctcttgttctcagggaggaacctctagatataatcgtgaaggtaga
agaggacatagcctttcctatggttctagcccaatcactccaaatcaactatcagacagc
tactgggaagagaagtggagatctatgtatgcatcagaagaacttaaaaagggaaatagc
accactaccacttcgagtgataagaaaaaggaagcagtagctagaaagttcagtctatca
aggacaggatctgttccttgtccaatggagataccaaacaaaaatggaggaccttctgat
gagaaaactattgtagacagtaatactgaaaatgaccaaagtaagtatagatgtggaatt
cccagtacttcagaggtagaaacagaatcatattttcatggggaacaggatgatcaaaat
atcaagagaaagcaatcagacgttgctggcgaaacatgttttagtgctgagaatttgtca
acaatgaccagtccccttagaatggtcaatgaccatgagtatgactcagatgaaagtagt
gccacatcaagttcgttggttgttgattcttatgatgagattaatcatgtggaagagcca
tgtagttacattattgataaggaaggtatcaccaagtgtataagcgaaagtggacatgga
tcaggtagagaagaaacagatgcagcacctctaaagcagcagaaaccacttgctggtaga
tttcagttgtttcaaaaatctaatagaggcggttgtcaaggtaacctagaaaatggaaca
gctgaatctaaaacatccttgttgatgcagattgttgcactatttctgttctacaaattt
aatcatccacgctgtaattccttttcagtgcatgaaaggatgaaagatgaggacaaagat
atcaatgtgactttaagaactatcggaaagtccatgtttgataaaatacagatcattgag
ttggccttaaagaaagatcaaatccctgaaaattctggaaatagcaggtcgaatgcagat
gatctcggacaacagcaaattgcggcatttgcagccctcgatgaacttcagaagattagc
aatttgttatctgagatgtaa
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