Zingiber officinale (ginger): 122030269
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Entry
122030269 CDS
T08725
Name
(RefSeq) probable rhamnogalacturonate lyase B
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
zof
Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
122030269
Enzymes [BR:
zof01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
122030269
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Motif
Pfam:
Rhamnogal_lyase
CBM-like
fn3_3
CarboxypepD_reg
CarbopepD_reg_2
Motif
Other DBs
NCBI-GeneID:
122030269
NCBI-ProteinID:
XP_042445380
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Position
10B:complement(85881732..85886507)
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AA seq
641 aa
AA seq
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MMAPIGVSLGVKDGRIMIDNGILQLTLSNPGGLITGIRYNDIDNVLEVHNEERNRGYWDS
VWNEPGGPGIFEVIEGTRFQIITQDDNQVEVSFTRRWDTSLQGKFVPLHIDKRFVVLRGC
SGFYTYAIYEHREGWPDFDMAETRVAFKLRKDKFHYMAIADNRQRIMPMPEDRMPPRGRQ
LAYQEAVLLLDPTNKDLKGEVDDKYQYSCEDKDIRVHGWICSKPHVGFWQITPTDEFRIG
GPVKQELTSHVGPTTLAMFMSAHYAGENLVPKFRNGEYWKKVFGPVFIYLNFSTDDADPQ
VLWEDAKLQAEIEVESWPYQFPASEDFQKSEERGCITGRLLVCDKFMDEDYMDANSAFVG
LALPGEAGSWQTECKGYQFWSRADEAGNFSIKNVRTGEYNLYGWVPGFIGDYRSEITIHV
SSGSQINLGNLIYEPPRDGPTLWEIGIPDRSAAEFFVPDPKPEWVNKLYVDHPDRFRQYG
LWERYTDLYPDTDLVYTVGVSDYSKDWFFAHVTRKTDDKDNQYQPTTWQIKFQIDNIDQM
GTYKLRVAIASANFSELQIRFNDSETNPPHFTTRLIGRDNAIARHGIHGLYWLFNVEVQS
IWLVQGDNTIYLTQSRSGSPFRGIMYDYIRMEGPPPTNTTM
NT seq
1926 nt
NT seq
+upstream
nt +downstream
nt
atgatggcgcctatcggcgtgagcttaggagtgaaagatggacggatcatgatagacaat
ggcattctgcaactgaccttgtcaaatcctgggggacttatcactggaatcagatacaat
gacattgataatgtcttagaagttcacaacgaagaacggaaccgaggatattgggattcg
gtgtggaatgaacctgggggtcctggcatattcgaagtaatcgaaggaacccggtttcaa
atcataacccaagacgacaatcaggttgaagtgtcatttacaagaaggtgggacacttca
ctgcagggcaagtttgttcctttacacattgataaaaggtttgtcgtgcttcgcggctgc
tcagggttctacacatatgcaatctatgagcaccgagaaggatggcctgactttgatatg
gctgaaactagggtagccttcaagcttaggaaagataagtttcattacatggcaatagca
gataacagacaaaggatcatgccgatgcctgaagatcgcatgcctcctaggggacgacag
ttagcatatcaggaggctgttctcctacttgacccaaccaataaagatttgaaaggagag
gttgatgacaagtaccaatattcttgtgaagacaaagacataagggtccatggatggata
tgttctaaacctcatgttggattttggcaaatcacacctaccgatgagttccgaatagga
gggcctgttaagcaagaactaacatctcatgttggccctacaacccttgctatgtttatg
agtgctcattatgctggagagaatcttgtgcctaagtttaggaatggtgaatactggaag
aaggtttttggtcctgttttcatctaccttaatttttctacagatgatgcagatccacaa
gttctttgggaggatgcaaaacttcaggcagagattgaagtggagagttggccatatcaa
tttccagcttcagaggatttccaaaaaagtgaggaaagaggttgtatcacagggagatta
ctcgtttgcgataagttcatggatgaagactatatggatgcaaattctgcttttgttggt
ttagcattaccaggggaagctgggtcctggcaaacagagtgcaagggatatcaattttgg
agcagagcagacgaagcaggcaatttctctattaaaaatgtgagaacgggagagtataat
ttgtatggatgggttcctggttttatcggagattacagatcagaaatcactatacatgtt
agttcaggtagtcagattaatttaggtaatcttatctatgaacctccaagagatggtcct
acattatgggaaataggtattcctgatcggtctgctgctgagttcttcgttccggatcct
aaacctgaatgggttaacaaactctatgtcgatcatcctgatagatttcgacaatatggc
ttatgggaaagatacactgacctatatcctgacactgatctggtttacactgttggtgtt
agcgactacagcaaagattggttctttgcgcatgttactagaaagactgatgataaagac
aatcaatatcaaccaacaacatggcaaataaagtttcaaatcgacaacatcgatcaaatg
ggaacctataagcttcgtgtggcaattgcatctgctaacttctctgagttacaaattcgt
ttcaatgactcggaaacgaatcctccgcacttcacgacgaggctaattggcagagacaat
gcgattgccagacatggaatccatggcttgtattggttgttcaatgtggaagtgcaaagc
atatggcttgttcaaggggataacacaatctatttaactcaatcgaggtctgggagtcct
tttaggggaatcatgtatgattatattaggatggaaggtccccctccaacaaacacaaca
atgtaa
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