Zingiber officinale (ginger): 122030287
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Entry
122030287 CDS
T08725
Name
(RefSeq) probable ribonuclease P/MRP protein subunit POP5 isoform X1
KO
K03537
ribonuclease P/MRP protein subunit POP5 [EC:
3.1.26.5
]
Organism
zof
Zingiber officinale (ginger)
Pathway
zof03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
122030287
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
zof03009
]
122030287
03016 Transfer RNA biogenesis [BR:
zof03016
]
122030287
03029 Mitochondrial biogenesis [BR:
zof03029
]
122030287
Enzymes [BR:
zof01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.5 ribonuclease P
122030287
Ribosome biogenesis [BR:
zof03009
]
Eukaryotic type
Pre-60S particles
RNases
RNase MRP
122030287
Transfer RNA biogenesis [BR:
zof03016
]
Eukaryotic type
5'processing factors
Ribonucrease P
122030287
Mitochondrial biogenesis [BR:
zof03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
RNase MRP
122030287
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_P_Rpp14
Pop8
Motif
Other DBs
NCBI-GeneID:
122030287
NCBI-ProteinID:
XP_042445400
LinkDB
All DBs
Position
10B:13346742..13350447
Genome browser
AA seq
155 aa
AA seq
DB search
MVQFKNRYLVMEIFIHGERDLIGRDTLRVVSSNSISKAIKESVQLNFGECGLALLLGSLQ
VKYVNGTTKICIIRVSRSEYQKVWSAITMIRTIGNNPATFNLLDLSGSIRACKKAAIKCE
EAKYEQYVLATGDSVGLDFTNARKDSIDKINALDS
NT seq
468 nt
NT seq
+upstream
nt +downstream
nt
atggtgcaatttaaaaatagatatttggtgatggaaatatttatacatggagaaagagac
ctcattggaagggatacattgagggttgttagctcaaacagtatctccaaagcaatcaag
gaaagtgttcagttaaattttggagagtgtggtctagctctattacttggatccctccag
gtgaagtatgtcaatggcacaacaaagatatgcatcatcagagtttctcgctcggagtac
cagaaagtttggtctgctattacaatgatcaggaccattggtaataacccagctacgttt
aatttacttgatttgagtgggagtatcagagcctgtaagaaagctgccatcaaatgcgag
gaagctaagtatgaacaatatgttttagctaccggtgatagtgttggtctggattttacc
aatgctagaaaagatagcattgataaaatcaatgcgttggattcttag
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