Zingiber officinale (ginger): 122030455
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Entry
122030455 CDS
T08725
Name
(RefSeq) E3 ubiquitin-protein ligase BIG BROTHER-like
KO
K19045
E3 ubiquitin-protein ligase BIG BROTHER and related proteins [EC:
2.3.2.27
]
Organism
zof
Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
zof04121
]
122030455
Enzymes [BR:
zof01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
122030455
Ubiquitin system [BR:
zof04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
122030455
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-rbx1
zf-C3HC4_2
zf-RING_11
zf-C3HC4
zf-RING_5
zf-RING_16
Prok-RING_4
zf-C3HC4_3
zf-RING_UBOX
zf_RING_Vps8
zf-C2H2_3
zf-ANAPC11
PHD_NSD
Caudo_TAP
RINGv
Motif
Other DBs
NCBI-GeneID:
122030455
NCBI-ProteinID:
XP_042445590
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All DBs
Position
10B:38523217..38532321
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AA seq
240 aa
AA seq
DB search
MSINTTQMDVHYINTGFPYTVTESFMDLFEGLTYAQADAALSETLHDQGNTYWSMMYTNA
YKYGFPGSSIDSYYDFGHFEVADYAQRSGERREWDNPLVVNNFDSQQTQHNEYAHESQNH
GAEECIQVQQNANSSQVIWEDHVDPDSMTYEELLELGETVGTQNRGLTQERIASLPITKY
KCSFFARKKTQRERCVVCQMEYKRGDRQMILPCKHVYHPVCVSRWLSINKACPICSVEVR
NT seq
723 nt
NT seq
+upstream
nt +downstream
nt
atgagtattaatactacacagatggatgttcattatataaatactggatttccttacact
gtcactgaaagctttatggatttgtttgagggccttacatatgctcaggctgatgctgcc
ctttcagaaactttgcatgaccagggaaacacatactggtcaatgatgtacacaaatgca
tataaatatggatttcctggctcttccattgattcatattatgattttgggcactttgag
gttgctgattatgcccaaagatcaggtgaaaggagagaatgggacaaccctctagttgtg
aacaattttgactcacaacaaacacaacacaatgaatatgctcatgaaagtcaaaatcat
ggtgccgaggagtgcattcaagtacagcaaaatgctaatagttctcaggtcatatgggaa
gaccatgttgatcctgatagtatgacttacgaggaattactcgagttgggtgagacagtt
ggaacacaaaaccgaggtcttacacaagaacggattgcttcacttcctatcacaaagtac
aaatgtagtttctttgccaggaagaaaactcaacgtgagagatgcgtggtttgccagatg
gaatacaagagaggagatcgtcaaatgattcttccatgcaagcatgtataccatcctgtg
tgtgtatctagatggcttagcataaacaaggcatgtccaatatgctctgttgaggtaagg
taa
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integrated database retrieval system
