KEGG   Zingiber officinale (ginger): 122030854
Entry
122030854         CDS       T08725                                 
Name
(RefSeq) splicing factor 3B subunit 2-like
  KO
K12829  splicing factor 3B subunit 2
Organism
zof  Zingiber officinale (ginger)
Pathway
zof03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:zof00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    122030854
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:zof03041]
    122030854
Spliceosome [BR:zof03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    122030854
 Complex B
    122030854
 Complex C
   U2 SnRNP specific factors
    122030854
SSDB
Motif
Pfam: DUF382 PSP
Other DBs
NCBI-GeneID: 122030854
NCBI-ProteinID: XP_042445839
LinkDB
Position
11A:complement(58288035..58300785)
AA seq 589 aa
MAAVELAHQSMTTIPNGDFTGDALTGKAFTASAEKKKARESERRRRRRKQKKNDKQSSSR
SEDLGEEMVSQEGKIERGAKANSDSHTEVDVTVEVEYVPEKADIDASLLEEFKSVIEKFN
FRDDAGGEDDIKKDETTGNAVAKKGDSDSEEDEQESHQKEKGLSNKKKRLQKRMKIAEIK
QICSRPDVVEVWDATAADPKLLVFLKSYRNTVPVPRHWCQKRKFLQGKRGIEKQPFQLPD
FIAATGIEKIRQAYVEKEDSKKLKQKQRERMQPKMGKMDIDYQVLHDAFFKYQTKPKLTT
HGDLYYEGKEFEVKLREMKPGMLSKELKEALGMPDGAPPPWLINMQRYGPPPSYPQLKIP
GLNAPIPPGASFGYHPGGWGKPPVDEHGRPLYGDVFGVQQQDQLIYEEEPVDRSKHWGDL
EEEEEEEEEEEEEEEMEEEELEAGIQSVDSLSSTPTGVETPDVIDLRKQQRKEPEKPLYQ
VLEEKEERIAPGTLLGTTHTYVLGAQDKAAPKRVDLLRGQKSDKVDVTIQPEELEVMDDV
LAAKYEEAREEEKLRNQKEDFSDMVAEQAANKRKRKEKEAKSKKKDFKF
NT seq 1770 nt   +upstreamnt  +downstreamnt
atggcagccgtcgagctggcgcaccaatccatgacgaccatccctaacggggatttcacg
ggagatgctctaaccgggaaagccttcaccgcttccgctgagaaaaagaaagcccgcgag
agcgagcgccgccgcaggaggcggaagcagaaaaagaacgacaaacaatcttcgtctcgc
tcggaagatctcggagaggagatggtttctcaggaagggaaaatagaaaggggtgctaag
gcgaactccgattctcacaccgaggttgatgtgacagtggaggtggagtatgttcctgag
aaggctgatatagatgcgagcttgctagaggaatttaagagtgttattgagaagttcaac
ttcagggatgatgctggtggtgaggatgatatcaaaaaggatgaaaccactggcaatgca
gtagccaagaaaggagattctgattcagaagaggatgagcaggagtctcatcagaaggag
aaaggactatcaaacaagaaaaaaaggcttcaaaagcgaatgaagattgcagaaataaaa
caaatttgctcaaggccagatgtagttgaggtctgggatgcaacagcagcagatccaaag
ttgcttgtttttcttaagtcatatcgtaatactgtgccagttccacggcattggtgtcaa
aaaaggaaattccttcagggaaagcgtggtattgagaaacagccatttcaactccctgac
tttattgctgcgactggcattgagaagataagacaggcatatgttgagaaagaggatagc
aagaagctgaaacaaaaacagcgtgaacgcatgcaaccaaagatggggaagatggatata
gattatcaggtcctgcatgatgcatttttcaagtaccaaactaaaccaaagttgacaacc
catggagatctatactatgaaggaaaagaatttgaggttaaacttagggaaatgaagcca
ggtatgttgtcaaaggaacttaaagaagcacttgggatgcctgatggcgcaccacctcca
tggcttattaatatgcagaggtatggccctcctccatcctacccccagttaaagatacct
ggtttaaatgctcccatccctcctggagccagctttggttatcatcctggaggttggggt
aaacctcctgttgatgaacatggacgcccactgtatggtgatgttttcggggtacaacag
caggatcaactcatctatgaggaagagccagttgatcggagtaaacactggggagatctt
gaggaagaggaagaggaagaagaagaagaggaagaagaggaagagatggaagaagaggaa
ttggaggctggcattcagtctgttgatagcctttcgagcactcccactggtgtagaaaca
cctgatgtcattgatttaaggaaacaacagcgcaaggagcctgagaaaccactttatcaa
gttcttgaagagaaggaagaaagaattgctcctggcactttgcttggaaccacacatact
tatgtgcttggggcacaagataaagcagctcccaaaagggttgatcttctacgcggtcag
aaatcagacaaggttgatgtcactatacaacccgaggagctggaagtcatggatgatgtt
ttagcagccaagtacgaagaagcacgagaggaagagaagctacggaaccaaaaggaagac
ttcagtgacatggttgcggagcaagctgcaaataagaggaaacgcaaagaaaaggaagca
aaatcaaagaagaaagatttcaagttctag

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