Zingiber officinale (ginger): 122031018
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Entry
122031018 CDS
T08725
Name
(RefSeq) dynamin-2A-like
KO
K01528
dynamin 1/3 [EC:
3.6.5.5
]
Organism
zof
Zingiber officinale (ginger)
Pathway
zof04144
Endocytosis
zof05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
122031018
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
122031018
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
zof04131
]
122031018
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
zof04147
]
122031018
Enzymes [BR:
zof01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.5 dynamin GTPase
122031018
Membrane trafficking [BR:
zof04131
]
Endocytosis
Clathrin-mediated endocytosis
Dynamin
122031018
Lipid raft mediated endocytosis
Caveolin-mediated endocytosis
122031018
RhoA-dependent endocytosis
122031018
Exosome [BR:
zof04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
122031018
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dynamin_N
Dynamin_M
GED
PH
PH_11
MMR_HSR1
PH_8
AIG1
GTP_EFTU
PH_20
RsgA_GTPase
Motif
Other DBs
NCBI-GeneID:
122031018
NCBI-ProteinID:
XP_042445998
LinkDB
All DBs
Position
11A:5277310..5290206
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AA seq
929 aa
AA seq
DB search
MEALEELSELADAMMQASALLADEDVDEGSTKRRTSTFLNVVALGNVGAGKSAVLNSLIG
HPVLPTGENGATRAPISIDLQRDSSLSSKSIVLQIDSKSQQVSASALRHSLQDRLSKGTG
VQGSGKGRADEIYLKLRTSTAPSLKLIDLPGLDQRLMDDSIVSDYGARNDAILLLIVPAA
LAPEISSYRALRLAKEFDSEGSRTIGIISKIDQAAGDQKCLAAVQALLLSQGPPSTADIP
WVALIGQSVSIASAQAGSVGSENSLETAWRAETESLKTILTGAPQSKLGRVALVDALSKQ
IRSRMKLRLPNLLSGLQGKSQIVQDELFRLGEQMVESAEGTRAIALELCREFEDKFLQHV
ATGEGSGWKVVATFEGNFPNRIKQLPLDRHFDINNVKRIVLEADGYQPYLISPEKGLRSL
IKGVLELAKEPSRLCVDEVHRVLLDIVSASANGTPGLGRYPPFKREVIAIASTALENFRN
EAKKMVVALVDMERAFVPPQHFIRLVQRRMERQRKEDELKNRSSKKANEAEQAILNRASS
PQQGAQGGSLKSMKDKSNQQDKETKEGSTSTLQVAGPSGEITAGFLLKKSAKTNGWSKRW
FVLNEKSGKLGYTKKQEEKHFHGVITLEECNLEEVPDEEDPPKSSKDSKKANGAEKSPTL
VFKITSKVAYKTVLKAHSAVILKAENLAEKVEWMNKIGNITGSSKVTSSKGAPESGVTPM
RQSHSDGSLDTMVRRPADPEEELRWMSQEVRGYVEAVLNSLAANVPKAVVLCQVEKAKED
MLNQLYSSVSAQSNAKITELLQEDQNVKRRRERIQKQSSLLSKLTRQLSIHDNRAAAASW
SDGSSAAESSPRTNGPGEDWRSAFDAAANGSVDSSHTDSSSRSRSSSSRRHGTPTQNGDA
SSGANSGSRRTPNRLPPGPPQNSSAGYKY
NT seq
2790 nt
NT seq
+upstream
nt +downstream
nt
atggaggcgttggaggaattgagcgagctggcggacgcgatgatgcaggcctctgccctc
ctcgccgatgaggacgtcgatgaggggtcgaccaagaggcggacctccacgttcctcaac
gtcgtcgctctcggcaatgttggggctggtaaatcagcagtgttgaacagcttaatcgga
cacccggtcctgccgactggagagaatggcgcgactcgcgcccctatcagtattgatctg
caaagggatagttcattgagtagtaaatcaattgtcttgcaaatagacagcaaatctcaa
caagtctctgcgagtgcccttaggcactctcttcaggacagactaagtaagggaactgga
gttcaaggttcaggaaagggccgtgcagatgagatatatctgaagctccgtactagtaca
gctccgtctttaaaattaattgatcttccaggtttagaccagaggttaatggatgattct
attgtcagtgattatggtgcacgcaatgatgcaatattgctacttatagtgccggctgct
ctggcacctgaaatatcttcttatcgagctcttagactggctaaggaatttgattcagaa
ggaagtagaaccattggtattatcagcaagatcgatcaagctgctggggaccagaaatgt
cttgcagcagttcaagctcttcttttgtctcaggggccaccctctactgctgatattcca
tgggttgctctgatcggtcaatctgtttctattgcttcagcacaagctggttctgttgga
tctgaaaattcacttgaaacagcatggagagctgagactgagagtcttaaaactatactt
actggtgctccacaaagtaagcttggaagagtagcattagttgatgcactttccaagcaa
attcgcagtagaatgaagctgagattgccaaatcttctttcaggattacaaggtaagtca
cagattgtgcaggatgagttgtttagacttggtgaacaaatggtggagagtgcggaaggc
accagagctattgccttggagctttgtcgagaatttgaagacaaatttttgcaacatgtt
gcgacgggtgagggttcaggttggaaagttgttgcaacatttgaagggaactttcctaac
agaataaaacaacttccactggataggcattttgatatcaacaatgtcaaaagaattgtg
ttggaggctgatggttatcagccatacttgatatctcctgagaaaggtttgcgatctttg
ataaagggagtattggaactagcaaaagaaccatcacgcctttgtgttgatgaggtccac
cgtgttctgttggatatagtttctgcttcagcaaatggtacacctggactaggtcgatat
cctccttttaaaagagaggtgattgctattgcatcaactgcattagagaacttcagaaat
gaggccaaaaagatggtggttgcattagttgatatggagcgtgcatttgttcctccgcaa
catttcatacgtctagttcagcggagaatggagaggcagcgtaaggaggatgagctgaag
aatcgatcatcaaagaaagcaaatgaagcagagcaagccatcttgaatagagcatcaagc
ccccaacaaggagctcaaggtggtagtttgaaatcaatgaaagataaatctaatcaacaa
gacaaagaaaccaaagagggttccacatccaccttgcaggttgctggaccttctggagaa
ataacagcaggattcttactgaagaaaagtgccaaaacaaatggctggagcaagcgatgg
tttgtcctcaatgagaaaagtggaaagcttggatacacaaaaaagcaggaggagaagcat
tttcatggggttatcactttggaggaatgtaaccttgaagaggttccagatgaggaagat
cctcccaaaagttcgaaggactccaaaaaagcaaatggagcagaaaaaagcccaaccctt
gtctttaagataactagtaaagttgcatataaaactgttttaaaagctcatagtgctgtg
attttaaaggctgagaacttggctgagaaagttgagtggatgaataagataggaaatatc
actggctcttcaaaagttacttcctcaaagggtgcacctgaatctggagttacaccaatg
agacaaagtcattctgatggttcacttgacacaatggttagaaggccagctgatcctgaa
gaagaacttcgttggatgtcccaagaagttcgaggttatgtagaggctgtattgaacagc
cttgctgctaatgtaccaaaggcagttgtgctatgccaagttgagaaagctaaggaagat
atgttgaatcaactatatagctcagtaagtgctcaaagcaacgcgaagattacagaacta
ctccaggaagaccaaaatgtgaagcgtagaagagaaaggattcaaaaacaatcatctctc
ctctcaaaacttacacgtcaactaagcatccatgacaacagagcggctgctgctagctgg
tctgatggtagctcggcagcagaaagtagcccaaggaccaatggtcctggtgaggattgg
agatcagcatttgatgctgcggcaaatggatcggtagacagctcacacactgactcatca
tctaggtccagaagcagcagcagccggcggcatggcaccccaacccagaatggcgatgca
agttcaggagcaaactctggtagtcgtcgtaccccaaacaggttgccacctggaccaccg
caaaacagttcagctggatacaaatactag
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