Zingiber officinale (ginger): 122031049
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Entry
122031049 CDS
T08725
Name
(RefSeq) long chain acyl-CoA synthetase 4-like isoform X1
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
zof
Zingiber officinale (ginger)
Pathway
zof00061
Fatty acid biosynthesis
zof00071
Fatty acid degradation
zof01100
Metabolic pathways
zof01212
Fatty acid metabolism
zof04146
Peroxisome
Module
zof_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
122031049
00071 Fatty acid degradation
122031049
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
122031049
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
zof01004
]
122031049
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
zof04147
]
122031049
Enzymes [BR:
zof01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
122031049
Lipid biosynthesis proteins [BR:
zof01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
122031049
Exosome [BR:
zof04147
]
Exosomal proteins
Exosomal proteins of breast milk
122031049
Exosomal proteins of breast cancer cells
122031049
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
PTEN_C2
Motif
Other DBs
NCBI-GeneID:
122031049
NCBI-ProteinID:
XP_042446032
LinkDB
All DBs
Position
11A:complement(97104603..97113052)
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AA seq
688 aa
AA seq
DB search
MGSSREMKHLVEVEKGQEAIDGRPSVGPVYRSAFAKDGFPPPVPGIDSCWDIFRLSAEKF
PGRNMLGRREVVDGKAGKYVWMTYKEVYDTVIKLGASLRSCGIEQGGRCGIYGANCTEWV
ISMEACNAHGIHCVPLYDTLGAGAVEFILCHAEVQIAFVEEKKIAEVLKTLHVSSQFLKT
IVSFGKVTSEQREVVEKSGLAIFEWDEFLLLGCDKQFDLPTKKKDDVCTIMYTSGTTGDP
KGVLISNKSIITLISGIDRFLLGVNEQLTEDDIYISYLPLAHIFDRVIEEMFIYRAASIG
FWRGDIKLLVEDIGELKPTVFCAVPRVLDRIFTGLQTKISTGGKLKQTLFNLSYKYKLHN
MARGSRHDEAARICDRLVFNKVKDGLGGNVRLILSGAAPLATHVEQFLRVVTCAHVLQGY
GLTETCAGTFVSLPNDLSMLGTVGPPVANVDVRLESVPEMNYDALSEVPRGEICIRGDTL
FSGYHKREDLTEEVMLDGWFHTGDIGEWQPDGSMKIIDRKKNIFKLSQGEYVAVENLENI
YGLVHDIDSIWIYGNSFESALVAIVNPNMQALEHWAQMNGTSGDFASLCQNSKAKEYILG
ELTKIGKEKKVICLNSSIIYLSIFKCHFVITQITFLQLKGFEFIKAVHLDPVPFDMERDL
LTPTYKKKRPQLLKYYESVIDDLYKSLK
NT seq
2067 nt
NT seq
+upstream
nt +downstream
nt
atgggcagcagccgcgagatgaagcacctggtagaggtggagaaggggcaggaggccatc
gacggccggccctccgtcggaccagtttaccgcagcgcctttgctaaggacggcttccct
ccgcccgtccctggtatagactcctgctgggacatcttccgtttgtctgctgagaaattt
cctgggaggaacatgcttggccgtcgagaagtcgtggatggaaaggccggtaaatatgtc
tggatgacttataaggaagtgtacgacactgtgattaaactcggggcttccctaaggagt
tgcgggatcgagcagggtggtcgttgtggtatctatggtgctaactgcactgagtgggtt
attagtatggaggcttgtaatgctcatgggattcattgcgttcctttgtatgatacactt
ggtgctggtgctgtagaattcattttatgccatgcggaggttcagattgcttttgtagaa
gaaaaaaagattgcagaggtgttgaaaacacttcatgtttcatcccaatttttgaagaca
attgtcagctttggtaaagtcacctctgaacaaagagaagtggttgaaaagtctggcttg
gcaatatttgagtgggatgagttcttactgttgggatgtgacaaacaatttgatcttcct
actaagaagaaagatgacgtgtgtacaattatgtacaccagtggtacaaccggtgatcct
aaaggcgtacttatctccaacaagagcatcattactcttatctctggcatagatcgattt
cttcttggtgttaatgagcagttaactgaagatgatatttatatatcatatcttcctctt
gcacatatctttgaccgggtgattgaagagatgttcatttatcgggcggcttcaatagga
ttttggcgtggggatatcaaattgttggtcgaagacattggggagctaaagccaaccgtc
ttttgtgctgttcctcgtgtgcttgatcgcatctttacagggctacagaccaagatttcc
acgggaggaaagctaaagcaaacattatttaacctctcttataaatacaaacttcataac
atggcaagaggaagtaggcatgacgaggcagctagaatttgtgatagattggtatttaac
aaggtaaaagatggacttggtgggaatgtacgactcatcctatctggagcagctcctcta
gcaacacatgtcgaacaatttctaagagtggtgacatgtgcacatgttttacaaggatac
ggtcttactgagacgtgtgctgggacgttcgtatcattgcctaatgacctttcaatgctt
gggacagtgggtccaccagtcgcaaatgttgatgtgcggctggaatctgtccccgagatg
aattatgatgctctttcagaagttcctcgtggagaaatatgcatcagaggagatacatta
ttttcaggctaccacaaaagagaggacctcacggaagaggttatgctagacggatggttt
cacacaggtgacattggtgagtggcagccagatggaagtatgaaaatcattgaccgaaag
aagaacatttttaaactttcacagggagaatatgttgcagttgaaaatttggagaacata
tatggccttgttcatgatattgattcaatatggatatatggaaatagttttgagtctgct
cttgtcgccatagtcaacccaaatatgcaagcgcttgaacattgggctcaaatgaatggt
accagtggagattttgcctcgctctgtcaaaattcaaaggcaaaagagtacattttgggc
gaacttacaaagattggaaaagaaaagaaggtgatttgtttgaactcgtcgataatttac
ctgtcaattttcaaatgccattttgtgataactcagatcacattcttgcagttgaaaggc
ttcgagttcattaaagctgttcacctcgatccagttccatttgacatggaacgcgacctg
cttaccccaacatacaaaaagaagaggccacagctactgaagtattacgagagtgtcatc
gatgatttatacaaaagcttgaagtga
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