Zingiber officinale (ginger): 122031092
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Entry
122031092 CDS
T08725
Name
(RefSeq) RNA-binding protein 39-like
KO
K13091
RNA-binding protein 23/39
Organism
zof
Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
zof03041
]
122031092
Spliceosome [BR:
zof03041
]
Common components
Common spliceosomal components
General mRNP proteins
122031092
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RBM39linker
RRM_MUD2_C
RRM_7
RRM_8
7TM_GPCR_Str
Motif
Other DBs
NCBI-GeneID:
122031092
NCBI-ProteinID:
XP_042446095
LinkDB
All DBs
Position
11A:complement(69671942..69688639)
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AA seq
555 aa
AA seq
DB search
MDFDEYEYLEKAVEEPEARKDKDRSGSRRHKDRGEDGEGRASKRSRPEEQNGDKRDRVER
ERDNDRAKDRRKSGRDSEKERDKDRDYRSREREYKDRDKGRERDSGKERERRKEKDKKRE
RERDKEKERDRSASRSRRDAERDRSASRSRKDAEREMETARSKERREPELEREIHERESR
RVKDKKDAEPEVDPERDQRTVFAYQMPLKANERDAYEFFSQAGKVRDVRLIMDRNSRRSK
GVGYIEFYDVMSVPLAIALSGQLLLGQPVMVKPSEAEKNLVQSTATAAGVAGAAERKIYV
GNLHYNITEEQLRQIFEPFGTVELVQLPLDETGHCRGYGFIQFAQLDHVKAAQSLNGKLD
IAGRIIKVSAVTDHVTVQETGTSAVDFDDEDGGGLSLNARSRAMLMQKLDRTGTASSIAE
SLGVPILNGAVPIQQPLSVPALSINPSMISVQQIPATVETSECLLLTNMFDPSTETEPDF
ELDIKEDVQEECSKYGRVKHIFVDKNSNGHVYLRFESVTAASICQRAMQGRWFAGRSVSA
TYMRQQDYESKVGRD
NT seq
1668 nt
NT seq
+upstream
nt +downstream
nt
atggatttcgatgagtacgagtacctggagaaggcagtggaggagcccgaagcgcgcaag
gataaggatcgctccggctcaaggcgtcacaaggaccgcggggaggacggagaaggaagg
gcttccaagagatccaggccagaagagcagaacggcgacaagcgcgaccgagtggagcga
gaacgggacaacgaccgggctaaggaccgccgtaaaagtggtcgggactctgagaaggag
cgggacaaagatagggattatcgcagccgagagagggaatacaaggacagagacaagggg
cgggagcgggacagtggaaaagaaagagagcgacgaaaggaaaaggacaagaaaagagaa
cgcgaaagggataaggagaaggagagggacaggagtgctagcagatccagaagggatgcg
gagagggacaggagtgctagcagatccagaaaggatgcggagagggaaatggagaccgcc
aggagcaaagaaaggagagagccagagctcgagagagagattcacgaaagagaaagcaga
agagttaaagataagaaagatgcagagcctgaagttgatccagaaagagatcagagaact
gtttttgcttaccagatgcctctgaaagctaatgaaagagatgcttatgagtttttctca
caagcggggaaggtgagggatgtccgcttgattatggatcggaactcaagaaggtcaaag
ggagttggatacattgagttttacgatgtaatgtcagtgccactggctattgcactctct
ggccaacttttattgggtcaacctgtaatggttaaaccttctgaagctgaaaagaatctc
gttcaatcaactgctacagctgctggtgttgcaggtgctgctgaaagaaagatttatgtt
ggaaaccttcactataacattacagaagagcaacttcgccagatttttgaaccatttggg
actgtggagcttgttcaattaccgcttgatgaaacagggcattgtcgaggttatggattc
attcaatttgctcaacttgaccatgtaaaggctgctcaaagtttaaatgggaaattggac
attgctggccggatcataaaggtttcggcagttacagatcatgtcactgtgcaggaaact
gggacaagtgctgttgattttgatgatgaagatggtggtggtttgtcactaaatgctcgt
tcaagagctatgctcatgcaaaagctggatcgcactggaactgcttctagcattgcggaa
tcacttggagtacccattcttaacggtgcagttcccatccaacagccactcagtgtgcct
gctctatcaatcaacccttcaatgatttctgtgcagcaaattccagctacggtggagaca
agcgagtgcttattgctaacaaatatgtttgatccaagcactgagacggagcctgacttt
gaattggatattaaagaggatgttcaagaagaatgttccaagtatggtcgtgtcaagcat
atatttgttgacaagaacagcaatggccacgtatatcttcgatttgaaagtgtgacagcg
gcttcaatatgtcagcgtgctatgcaaggtcgatggtttgcagggaggtcagtctcagcc
acttatatgcgacaacaagattacgaatccaaagttggacgtgactga
DBGET
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