Zingiber officinale (ginger): 122031125
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Entry
122031125 CDS
T08725
Name
(RefSeq) peptidyl-prolyl cis-trans isomerase CYP71-like isoform X1
KO
K12736
peptidylprolyl isomerase domain and WD repeat-containing protein 1 [EC:
5.2.1.8
]
Organism
zof
Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
zof03041
]
122031125
03110 Chaperones and folding catalysts [BR:
zof03110
]
122031125
Enzymes [BR:
zof01000
]
5. Isomerases
5.2 cis-trans-Isomerases
5.2.1 cis-trans Isomerases (only sub-subclass identified to date)
5.2.1.8 peptidylprolyl isomerase
122031125
Spliceosome [BR:
zof03041
]
Complex C
Other components
PPlases
122031125
Chaperones and folding catalysts [BR:
zof03110
]
Protein folding catalysts
Peptidyl prolyl isomerase
Cyclophilin
122031125
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pro_isomerase
WDR55
WD40
WD40_Prp19
Beta-prop_EML
Beta-prop_TEP1_2nd
WD40_CDC20-Fz
Beta-prop_EML_2
EIF3I
WD40_WDHD1_1st
WD40_MABP1-WDR62_2nd
NBCH_WD40
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_C
Beta-prop_Vps41
Beta-prop_IFT140_1st
Beta-prop_WDR19_2nd
Motif
Other DBs
NCBI-GeneID:
122031125
NCBI-ProteinID:
XP_042446140
LinkDB
All DBs
Position
11A:complement(40797829..40850968)
Genome browser
AA seq
626 aa
AA seq
DB search
MDEGQRKPAADTALPTPPTDDGDEEAIVGPGPAPRSRPKRPLHFEQTFLDSLPSAHMYEK
SYMHRDVVTHVAVSSADFFITGSSDGHLKFWKKKPVGIEFAKHFRSHQGPIEGLAVSVDG
LLCCTISNDPFIKIYDVVNYDMMFMMRLPYVPGAVEWVYRQGDVKAKLAISDHNSAFVGI
YDVREGSNEPIISKEIHMGPIKVMKYNHVNDIVISSDAKGIIEYWCSDKLQFPEIGVSFK
FKTDTNLFEIAKCKTTVSAIEVSRDGSQFSVTSPDRRIRVFWFKTGKLRRVYDESLEVAQ
DLQRSDAPLYRLEAIDFGRRMAVEKEIEKTENVPQPNAIFDESCNFIIYATLLGIKIVNL
HTNKVARILGKVENNDRFLRIAIYQGDKSSKKVRKIPATVANVNESKEPLTDPTLLCCAF
KKHRIYLFSRREPEEPEDATKGRDVFNEKPPPEELLAVSELGKAVTTSLPDNVVLHTSLG
DVHLRLYPEECPKTVENFTTHCRNGYYDNLIFHRVIKGFMIQTGDPLGDGTGGQSIWGRE
FEDEFHKSLRHDRPFTLSMANAGPATNGSQFFITTVATPWLDNKHTVFGRVVKGMDVVQA
IEKVKTDKNDKPYQDVKILNVTVPKS
NT seq
1881 nt
NT seq
+upstream
nt +downstream
nt
atggacgaaggacaaaggaagccggcggcggatacagcactaccgacgccaccgacggac
gatggagacgaggaagcgatcgtagggcctggtcccgccccgcgctctcgccccaagcgg
cctctccactttgagcaaacctttctcgactcacttcccagcgcccacatgtatgagaag
agttatatgcacagggacgtggtcactcatgtggccgtctcatctgccgacttcttcatc
actggaagcagtgatgggcacttaaagttctggaagaaaaaaccggtgggaattgagttt
gctaaacatttcagatctcaccaaggtccaatagaaggcttggctgttagtgttgatggc
ttactctgttgtacaatatccaatgatccattcataaagatttatgatgttgttaactat
gatatgatgtttatgatgcgcctcccatatgtgcctggtgcagtcgaatgggtatatcgg
cagggtgatgtgaaggccaagctggcaattagtgatcataattctgcttttgttggaata
tatgatgtgcgtgaaggttcaaatgaacctatcatctcaaaagagattcatatgggaccc
ataaaagttatgaagtacaatcatgtgaatgatattgtcatatcaagcgacgctaaaggg
attattgaatactggtgttctgataagcttcaatttcctgaaattggtgtaagttttaag
tttaaaactgacacaaatctgtttgagattgcaaagtgcaagacaacagtttctgccatc
gaggtaagccgagatggcagtcagttttccgtaacatctccagatcgcaggattcgtgta
ttctggttcaaaactggtaaactaaggcgtgtgtatgatgaatctctcgaggtggcacaa
gatctacagcggagtgatgctcctttgtatcgccttgaggctattgattttgggcgaaga
atggccgttgagaaggaaatagagaagaccgaaaatgttccacagccaaatgcaattttt
gatgagagctgtaactttattatttatgcaactcttcttggcataaaaattgttaattta
catacaaataaagtcgcacggatacttggaaaagtggagaacaatgatagatttttaaga
attgctatatatcaaggtgacaagagtagtaagaaggtaagaaagattcctgcaacagtg
gcaaatgtcaacgagagtaaagagcccttgacagatcctacacttctttgctgtgctttt
aagaaacatagaatttacttgttcagccgaagggaacctgaagaacctgaagacgctaca
aagggaagagacgtgtttaatgagaagcccccacctgaagaacttttggcagtatctgag
ttaggaaaagcagtcacaacatcccttccagataatgtggtgctacacacatcgctgggt
gacgttcacttgagattatatccagaagagtgcccaaagactgtggaaaacttcacaaca
cattgtcgaaatggttattatgataatctcatcttccaccgtgtaattaaaggatttatg
atacaaacaggagatccattgggtgatggcactggtggacaatctatatggggaagggaa
tttgaggatgagtttcacaaaagcttaagacatgacagacctttcacactgtcaatggcg
aatgctgggccagctaccaacggttctcagttcttcattaccacagtggctactccatgg
ttggacaataagcatactgtttttggtagagttgtgaagggaatggatgttgttcaggca
atagagaaggttaagactgataagaatgacaagccttatcaggacgtaaagatattaaat
gttacagttccaaaatcttag
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