Zingiber officinale (ginger): 122031137
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Entry
122031137 CDS
T08725
Name
(RefSeq) 25.3 kDa vesicle transport protein-like isoform X1
KO
K08517
vesicle transport protein SEC22
Organism
zof
Zingiber officinale (ginger)
Pathway
zof04130
SNARE interactions in vesicular transport
zof04145
Phagosome
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
122031137
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
122031137
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
zof04131
]
122031137
Membrane trafficking [BR:
zof04131
]
SNARE
VAMP, Ykt6, Sec22 (R)
Sec22
122031137
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Gene cluster
GFIT
Motif
Pfam:
Longin
Motif
Other DBs
NCBI-GeneID:
122031137
NCBI-ProteinID:
XP_042446155
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Position
11A:complement(12180055..12188238)
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AA seq
268 aa
AA seq
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MKKLGNCISQEKLTDNFVPTYLTSLSFLSAPKAPAELNAKVGTSKMVKLTLVGRLRDGLP
LSQAPAHLNEDNLVLSSYKYKAELVLKEISRGALTNPKMTVLIDHHCFHCLVGDGICCIT
LCESWYPRKLAFYYLQDLRNALAKVDRRVLESFSEPYAFKRFDYVIGKIRERYLDTRTQE
NLFKLNSDRRNDPDIATEELANIMRSCHSSGSEARTSANAQTKSTIWSSQVLEVIALKWT
PITIIAVVIAILVWTRIVLNEYDTLTAW
NT seq
807 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaagttaggcaactgtatatcccaagaaaagcttactgataactttgttccaact
tatctcacctccttaagctttctttctgctccaaaagctcctgctgaattgaatgcaaaa
gttggcacttcaaagatggtgaagctaaccttggttggaaggttgagggatggactgcct
ttgtcacaagcaccagctcacttgaatgaagataatcttgtcttgtcatcctacaagtat
aaggcagagcttgtgctcaaggagatctcaagaggagccttgacaaaccccaagatgaca
gtccttattgatcaccattgtttccattgtctagttggagatggaatttgctgcatcacc
ctatgtgagtcatggtacccaaggaaattggcattttactatcttcaggatctccgaaat
gcacttgcaaaggttgataggagagttttagagtcattctcagagccatatgcatttaaa
agatttgattatgtcattggcaaaatcagagagagatatctggacacaagaacacaggag
aatttatttaagttgaattctgatcgccgaaatgatcctgatattgcaacagaggaatta
gccaacataatgaggagctgccattcatcaggatctgaagcaagaacatctgccaatgct
cagacgaagtcgacaatttggagctcacaagttctcgaggtgattgccctgaaatggaca
ccaataacaattattgcggtcgtaattgcaatcctcgtttggacgcgtattgtcctgaac
gagtacgatacgttaacagcatggtga
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