Zingiber officinale (ginger): 122031139
Help
Entry
122031139 CDS
T08725
Name
(RefSeq) vacuolar protein sorting-associated protein 53 A-like isoform X1
KO
K20299
vacuolar protein sorting-associated protein 53
Organism
zof
Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
zof04131
]
122031139
Membrane trafficking [BR:
zof04131
]
Protein recycling
Others
EARP complex
122031139
Endosome - Golgi transport
Tethering complex
GARP complex
122031139
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps53_N
VPS53_C
Vps54_N
RINT1_TIP1
COG4_N
COG7
HemX
XhlA
MPH2
LXG
COP9_hel_rpt
Motif
Other DBs
NCBI-GeneID:
122031139
NCBI-ProteinID:
XP_042446165
LinkDB
All DBs
Position
11A:complement(93847186..93862781)
Genome browser
AA seq
840 aa
AA seq
DB search
MDKSSALEYINQMFPNEASLSGVEPLMQKIQSEIRRVDASILAAVRQQSNSGTKAKEDLA
SATHAVQELMHKIREIKTKAEQSETMVQEICRDIKKLDCAKKHITTTITALHRLTMLVSA
VEQLQIMASKRQYKEAAAQLEAVNQLCNHFEAYRDVPKISELREKFKNIKKILKSHVFSD
FSSLGTGKETEETNLLQQLTDACLVVDALEPSVREELVRNFCSKELTSYRQIFEGAELAK
LDKTERRYAWIKRRLRTNEDVWKIFPSAWHVDYLLCIQFCKMTRSQLVDILNNLKEKPDV
ATLLMALQRTLEFEEELAEKFSGGTASTRNTEFGSDEEPGEGESNKKIVSDIRKKYEKKL
ALQHGGDELDKDKQKDLTVPGAGFNFRGIISSCFETHLAVYVELEEKTLMEHLEKLVQEE
TWETEEGSQTNILSSSMQVFLIIRRSLKRCSALTKNQTLFNLFGVFQRILKAYATKLYAR
LPKGGAGIVATATGTDGQIKTSDRDERMICYIINTAEYCHKTSGELAENVSKIIDPSFVD
KVDVSEVQDEFFQVITKALVTLVHGLETKFDAEMIAMTRVPWATIESVGDQSEYVNGISS
ILGSSIPVLGSLLSPTYYQFFLDKLAASLGPRLYHNIFKCKQISETGAQQMLLDTQAVKT
ILMEIPALGKQTAVAASYSKFVGREMSKAEALLKVILSPIDSVGNTYRALLPEGTPAEFQ
RILDLKGLKKADQQGILDDFNKHNSAIRHPSVAPSVVIPSAPISAPAAPSTSTTATSSVI
AAPASNNTSTSVVMTSREDVLARAAALGRGAATTGFKRFLALTEAAKDRKDGPFRKLFSP
NT seq
2523 nt
NT seq
+upstream
nt +downstream
nt
atggacaagtccagtgctttggagtacatcaaccagatgtttcctaacgaagcatcatta
tctggggtggagccacttatgcagaaaatacaaagtgagatacgccgtgtggatgcaagt
atattagctgcagttcgacaacagagtaactctggcacaaaagcaaaggaagatcttgct
tctgcaacacatgctgttcaggaactcatgcacaaaatacgtgaaataaaaacaaaggct
gaacaaagtgaaacaatggttcaagaaatttgtcgcgatattaagaaattggactgtgca
aagaaacatataacaaccacgattacagctcttcatcgtcttaccatgctagtatcagct
gttgaacaacttcaaataatggcttcaaaacgccagtataaggaagctgctgcacagttg
gaggcagtaaaccagttgtgcaatcactttgaagcatacagggatgtaccaaaaatatct
gagcttagagagaaattcaagaacatcaagaaaattcttaaatctcatgtattttcagac
ttctcaagcttaggtactggaaaagagacagaagaaactaatttgctgcagcagttgaca
gatgcttgcttggtcgtggatgcactagagccatctgtaagggaagaactagtaagaaat
ttctgcagcaaggagcttacttcatatcgccagatatttgagggagcagaactagcaaag
ctggataagacagagaggagatatgcatggattaagcgtcgattgcgaactaatgaggat
gtttggaaaattttcccttctgcatggcatgttgactatctcctgtgcatccagttctgt
aagatgaccaggtcacagcttgtggatattctcaataatctgaaagagaaaccagatgtt
gcaacactactaatggcacttcagcgaactcttgaatttgaggaagagttggcagaaaaa
tttagtggaggaactgcaagcactcggaatacagaatttggtagtgatgaagaacctggt
gagggagaaagcaacaagaaaattgtctcagacattcgcaagaaatatgagaaaaagctt
gctttgcaacatggtggagatgaattagacaaggacaagcaaaaagatttgacagtgcct
ggggctgggtttaacttccgtggaattatttcatcttgctttgaaacacatttggcagtg
tatgtagagctagaggagaagactctaatggaacacttggaaaaacttgttcaggaagaa
acttgggaaactgaagaggggagccaaactaatattttgtcaagtagcatgcaggtattc
ctaataataaggagaagcttaaaaagatgcagtgctttaacaaagaatcagacattgttt
aatttgtttggggtgttccaaagaattttgaaagcatatgcaacaaagctgtatgctaga
ttgcccaaaggtggcgctgggattgttgcaactgctactgggacagatgggcagattaag
acttctgacagagatgagagaatgatatgctatatcatcaacactgcagagtattgccat
aaaacttctggtgagctagctgaaaatgtttcaaagattattgatccttcatttgtagat
aaggtggacgtgtcagaagttcaggatgagttcttccaggtgattacgaaagcattagtg
acactagtccatggtctagagacaaagtttgatgctgaaatgatagccatgacacgagta
ccttgggcaactattgaaagtgtcggtgaccaatcagagtatgtcaatggtatcagctct
attcttggaagtagtattcctgtgcttggaagcctactctcccctacttactaccagttc
ttcttggacaagttagcagcgtctcttggtccacgtttataccataacattttcaaatgc
aaacaaatatcagaaactggtgctcaacagatgttattggatactcaagcagtaaagaca
atccttatggagattcctgcattgggaaagcagacagcagttgctgctagctattcaaaa
tttgttggtcgtgagatgagtaaagctgaagccctgttgaaggttatattatctccgata
gattctgttggaaatacttatagagcactacttcccgagggaacacctgctgagttccag
aggattcttgacctgaagggcttaaagaaagcagatcaacaaggtattcttgatgatttt
aacaagcacaactctgcaatcaggcatccatctgtggcaccatcagtagtaatcccctcg
gcaccaatctctgcccctgctgcaccatcaacatctactactgctacatcttcagtcata
gctgctccagcaagtaataatacatctacttccgtagttatgacctcccgggaagatgtc
ctagctcgggctgcagctcttggtaggggagcagcgacaacaggatttaagcggttcctt
gcattaacagaagctgccaaggataggaaagacgggcccttccgtaaactcttcagccct
tag
DBGET
integrated database retrieval system
