Zingiber officinale (ginger): 122031185
Help
Entry
122031185 CDS
T08725
Name
(RefSeq) autophagy-related protein 11-like
KO
K08330
autophagy-related protein 11
Organism
zof
Zingiber officinale (ginger)
Pathway
zof04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
122031185
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
zof04131
]
122031185
03029 Mitochondrial biogenesis [BR:
zof03029
]
122031185
Membrane trafficking [BR:
zof04131
]
Autophagy
Cytoplasm to vacuolar targeting (CVT) pathway
Scaffold protein
122031185
Mitophagy
Scaffold proteins
122031185
Mitochondrial biogenesis [BR:
zof03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
122031185
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ATG17_like
ATG11
ubiquitin
ATG16
PHA_synth_III_E
PnsB4_C
TIL_OTOGL_Mucin
IKKbetaNEMObind
Motif
Other DBs
NCBI-GeneID:
122031185
NCBI-ProteinID:
XP_042446253
LinkDB
All DBs
Position
11A:8310185..8318072
Genome browser
AA seq
1161 aa
AA seq
DB search
MSSGSMVTSTTTAEDVVLGKKLLVHVAENGHSLEFECDGSTPVEAIQRSIEVHCGVALAE
QLLLCRNTSLDAQQTLSYYKLPQDDREVFLYNKARLHDDSPRPPLEAIEVPKPAVPPPPS
PANDSHPLDNAPDPALKALVSYERQFRYHFQFGNALYGCSQAKLELCKRLLREQQVQGRA
LDTARGNLEHTFKKLHQRYTEFIRSFAQQHKSHSDLLANFERDVEKLRSLRLHPKLQSKN
RKCLLDLVKEDDLRKCMDSCLGPHRQFENQVSQLKMSFMELKRRFENLISSISSASWAEL
ENLIKNHQKILNDQKTIMQSLSKDVESAKKLVDDSNLPLSSSLRPHDAVSALGRIYDVHE
KNHLPNMQNCDHLMSKLLDKCKLKKNDMNLLVHLSMQKVRSVQFGIKETINELHAYQEVM
GHQDREFENVRIVNGVGQAYRACLAEIVRRKSSLKLYMGLGGQLAEKLATEREAEIRRRE
SFLKSWSKYIPNDLLATMGLFDSPSQCDVHITPFDGNLLEIDMVDVDRFAPVSLGGLISM
SEKHAQEKYFSAACGSSDITKSEEISLQSGEKVHFLDGCESVDIAGTSRLEVENAQLKAE
LASAIAMICALNADTGYDSNEFTKDDDMLKNLKEKTVEALKLKDDFADHLQSMLNMKREQ
CLSYEKRIKELEQGLSDQYLHGQKLAGKNVSDSDMSSVKNDSSKFGVFGEGDAHIPFTST
MMMDEVSITSGLLDPKMDHVFGQASKAAEGGDENMSDLSGTLNLHAINSTHNLMDASMLE
QPRDEGKVDPLVDAVKMMTSQLTMTKDSSSIGAGNAKNILPCETSDKPLLESKNRDDLVI
GLQDALVEKSKKCDELENKLKATMEEIGSLKKELEMNQSLLDESQMNCVHLENCLHEARE
DARTNLCAADRRASEYNALRSKAVKMHSFFERFRSCVTAPGTVANFGDSLCSLAQSLGSS
LSEDEDDVTREFQACIKVFADKVTFLSRHRAELSERCSRAEVVRGNLLRELEEKNEQLKS
LYSKHQLEKQANKEKIAFGRFEVHELAAFVLNSAGHYEAINRNCPKHYLSEECVALFKEQ
HSVSPIYIIGQIVHIERQVVRPSVSPRSQRGDQLEASNNSETSSRRLLGPTAASNPYNLP
IACEYAIVTIAMLPDTIHSAS
NT seq
3486 nt
NT seq
+upstream
nt +downstream
nt
atgagttccgggtcgatggtgacgtcgaccaccaccgccgaggacgtcgtcctcgggaag
aagctcctggttcacgtcgcggagaacggtcacagcttggagttcgagtgcgacggctcc
acccccgtcgaggccatccagcggtccatcgaggtccactgcggcgtcgccttggcggag
cagctcctgctgtgccgtaacacctcgctggatgcgcagcagacgttgtcgtactacaag
ctcccccaggacgaccgtgaggtctttctctacaacaaggctcggctccacgatgactcc
cccaggccgcccctggaagctatcgaagttcccaagccggccgtccccccaccgccttct
ccggccaatgattcgcaccctttggacaatgcgcccgacccggcgctgaaggctttagtt
tcctacgagcgccagttccgttaccatttccagttcggcaacgcgttgtatggctgctct
caggcgaagttggagttgtgcaaaagacttctgagggagcaacaggttcaggggagggca
ctggacactgctcgcggcaatcttgaacacacatttaagaagctgcaccagagatataca
gaattcattaggagctttgcccagcagcacaagagccactctgacctcctcgccaacttc
gaaagggatgtggaaaagcttcggtccttgaggctccatccgaaattgcaatcgaaaaac
cgcaagtgcttgcttgatcttgtgaaggaggatgacctaagaaagtgcatggatagttgc
ttgggtcctcaccggcagtttgaaaatcaagtttcacagttgaaaatgagttttatggag
ctgaagagaaggtttgagaatttaatctcatctattagctcagctagttgggcggagttg
gaaaatcttataaaaaatcatcagaagattcttaatgatcagaaaactataatgcagtca
ctgagtaaggatgtcgaaagtgctaagaaacttgtggatgattccaatctgccactttct
tcctcacttcgccctcatgatgctgtgtcagctctcggtcgaatatatgatgtgcatgaa
aaaaatcaccttccaaatatgcagaattgtgatcatctcatgtcaaagttactcgataag
tgcaagttaaagaaaaatgacatgaatttgttggtccatctcagtatgcagaaggttagg
tctgttcaattcggcatcaaagaaacaatcaacgagcttcatgcatatcaagaagtaatg
gggcatcaagaccgggagtttgaaaatgtaagaattgtcaacggtgtaggacaagcatat
agagcttgccttgccgagattgtaagaaggaaatcttctttgaagttgtacatgggcctt
ggcgggcaactggctgaaaagcttgcaacagagagggaagctgagattagacgacgggag
tccttccttaaatcttggagtaaatacataccgaatgacttgttagctactatgggattg
tttgattctccaagtcagtgtgatgtgcacataacaccttttgatggaaacttgctggag
attgacatggtagatgtagatcgatttgcaccagtgtcgttaggaggattgatctctatg
tctgagaagcatgcacaagagaaatatttctctgctgcatgtggcagcagcgatatcact
aaatctgaagaaatttctttacagagtggtgagaaggttcattttcttgacggttgtgaa
tctgtggatattgctggaactagtaggctggaagttgagaatgcacaattgaaagctgaa
cttgcttcagcaatcgctatgatctgtgcactcaatgctgatactggatatgactcaaac
gaattcacaaaggatgatgatatgttgaaaaatctgaaggagaagacagttgaggcgctt
aaattaaaggatgactttgccgatcatcttcagtctatgctaaatatgaagcgagaacaa
tgcttgtcttacgaaaaaaggatcaaagagcttgagcagggtttgtcagatcagtatttg
cacgggcaaaaacttgcaggtaaaaatgtttcagattctgatatgtccagcgtcaagaac
gattctagtaaatttggtgtttttggagaaggtgatgctcacatacctttcacgtcaacc
atgatgatggatgaagtatctatcacttctggtttgttggatccaaagatggatcatgtt
tttggacaggcaagtaaagcagctgaaggtggagatgagaatatgagtgatctttctggc
acacttaatttgcacgctatcaactctacccacaatttaatggatgcttcaatgctagag
caacctcgggatgaaggcaaggttgaccctcttgtcgatgcagtgaaaatgatgacatca
cagttgaccatgacaaaggattcatcgagtattggtgctggaaatgctaagaacatttta
ccttgtgaaacttctgataagccacttttggagtccaaaaatagagatgaccttgtgata
ggcctacaagacgccctagtggagaagtcaaagaagtgtgatgaattggaaaacaagctc
aaagcaactatggaggagatcggctccttaaagaaagaactggagatgaatcaaagccta
cttgatgagtcacagatgaactgtgtccatttggagaattgcctgcacgaagcaagggag
gatgcccgcacaaacttgtgtgcggcggacagaagggcctcggagtacaacgctctgcgt
tcaaaagctgttaagatgcatagtttctttgaacgatttcgcagctgtgttactgctcct
ggtactgttgccaatttcggagactcgttatgttctttggctcagtctcttggcagttct
ctcagtgaggatgaagatgatgttaccagggagttccaagcctgtataaaggtgtttgcc
gataaggtgacctttttgtctcgccatcgcgctgagctctccgagcgctgttcaagagca
gaagttgtacgagggaatctcctaagggaactcgaagagaagaacgagcaacttaaaagc
ttatacagtaaacatcaactagagaaacaggcaaacaaggagaaaatcgcttttggtcgt
tttgaggttcacgagctcgccgcctttgttttgaactctgctggacactacgaggcgatc
aaccgaaactgcccaaagcactacctctccgaagagtgcgtcgctctgttcaaggaacaa
cattcagttagtccaatttacataattggacagatagtgcacatcgaacggcaagttgta
cggccatcggtgtctcccaggagtcagcgcggagatcagctagaggcttcaaacaacagc
gaaaccagtagccgtcggttgctcggaccgactgctgcatcgaacccttacaatcttccc
attgcttgtgaatacgccatagtgacgattgcgatgctacctgacaccattcattcggct
tcctga
DBGET
integrated database retrieval system
