Zingiber officinale (ginger): 122031230
Help
Entry
122031230 CDS
T08725
Name
(RefSeq) probable pyridoxal 5'-phosphate synthase subunit PDX1.1
KO
K06215
pyridoxal 5'-phosphate synthase pdxS subunit [EC:
4.3.3.6
]
Organism
zof
Zingiber officinale (ginger)
Pathway
zof00750
Vitamin B6 metabolism
zof01100
Metabolic pathways
zof01240
Biosynthesis of cofactors
Module
zof_M00916
Pyridoxal phosphate biosynthesis, R5P + glyceraldehyde-3P + glutamine => pyridoxal-P
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00750 Vitamin B6 metabolism
122031230
Enzymes [BR:
zof01000
]
4. Lyases
4.3 Carbon-nitrogen lyases
4.3.3 Amine-lyases
4.3.3.6 pyridoxal 5'-phosphate synthase (glutamine hydrolysing)
122031230
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SOR_SNZ
Motif
Other DBs
NCBI-GeneID:
122031230
NCBI-ProteinID:
XP_042446304
LinkDB
All DBs
Position
11A:complement(12005919..12006577)
Genome browser
AA seq
166 aa
AA seq
DB search
MPIVTPEQARIAEEAGACAVMALERVPADIRSQGGVARMSDPDDQNHINKHNFLLPEALR
RIREGAAMIRTKGEVGTGNIIEAVRHLRSVVGGIRALSNMDDDEVFAFAKRIAAPYDLVM
QTKRLGRLPVVQATSIMNPFTPHSPSPSPSPSPSYLSPSLLPLFCF
NT seq
501 nt
NT seq
+upstream
nt +downstream
nt
atgccaatcgtcacccctgagcaggctcgtatcgccgaagaggctggagcctgcgccgtc
atggcgctggagcgcgtcccagcagatatccgctcccagggcggcgtcgcccgcatgtcc
gatccagatgaccagaaccacatcaacaagcacaatttccttctgcccgaggccctccgc
cgcatccgcgagggcgccgccatgatccgcaccaagggcgaggtcggcactggtaacatc
atcgaggccgtccgccaccttcgttccgttgtcggcggcatccgcgctctgagcaatatg
gacgatgatgaggtgttcgccttcgccaagcgcatcgctgccccttacgaccttgttatg
cagaccaagcggctagggaggctccctgtcgtccaagcaacgagcattatgaatcccttc
accccgcactccccctccccctccccctccccctccccctcttatctttctccgtctctt
cttcctctcttttgtttttaa
DBGET
integrated database retrieval system
