KEGG   Zingiber officinale (ginger): 122031314
Entry
122031314         CDS       T08725                                 
Name
(RefSeq) RNA-binding protein 24-B-like
  KO
K12741  heterogeneous nuclear ribonucleoprotein A1/A3
Organism
zof  Zingiber officinale (ginger)
Pathway
zof03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:zof00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    122031314
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:zof03019]
    122031314
   03041 Spliceosome [BR:zof03041]
    122031314
Messenger RNA biogenesis [BR:zof03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     122031314
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     122031314
Spliceosome [BR:zof03041]
 Common components
  Common spliceosomal components
   hnRNP proteins
    122031314
SSDB
Motif
Pfam: RRM_1 RRM_7 RRM_Nup35
Other DBs
NCBI-GeneID: 122031314
NCBI-ProteinID: XP_042446373
LinkDB
Position
11A:26968407..26970758
AA seq 252 aa
MSLSSMLLSPLSPAQLSFATSVAVVALPTLHGKCVLIEGRLATCNLAWDGLNSTSGTGDL
ALRKIYIGGLSPNISSEILLNFFGRYGEIEEGSVAYHKETNKSRGFGFVTYRTAEGAKKA
IDDPNKTRGRLYKTLSFHFCSQQVFLVAPSTKSLHIQGRNITAKLADAPRSKVIQAQVPT
AVVPMHIPVPIGYAPMGKAQVGSYASYPPTMAAYLTAYASTQFTTAAQVSHPQTGKRKQV
VVPAVESNGVTG
NT seq 759 nt   +upstreamnt  +downstreamnt
atgtcattgtcatccatgttgctatcgccgctatcaccagcacagctgtcatttgctacc
agcgttgccgtcgtcgctttaccaactctccacggcaaatgcgttttgattgagggacgt
ttggctacctgtaatcttgcatgggatggcctaaacagtacttcggggactggtgattta
gcactgagaaagatatacattggaggtctttctccaaacatatccagcgaaatcttgctc
aatttcttcggtaggtatggtgagattgaagaaggttcggtggcataccataaggagact
aacaaatcaagaggatttggttttgtcacttataggacagctgagggtgcaaagaaagcc
atagatgatccaaataagactcggggtcggctatacaaaacactcagttttcatttttgc
tcacaacaagtatttcttgttgccccctcaacaaaatctttacatatacagggaaggaac
attactgcgaagctagctgatgcccctaggagcaaagtaatacaagcacaagttccgact
gctgttgtccctatgcacatcccagttcctattggatatgcaccgatgggaaaggcacag
gtgggcagctatgcttcgtatccaccaacaatggcagcatatctcactgcttatgcctca
acccagttcacaactgcagcacaggtttcgcacccacagacagggaaaaggaaacaagtt
gtagtgcctgccgtagagtcaaatggagttactggctaa

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