Zingiber officinale (ginger): 122031369
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Entry
122031369 CDS
T08725
Name
(RefSeq) amino acid transporter AVT1A-like
KO
K15015
solute carrier family 32 (vesicular inhibitory amino acid transporter)
Organism
zof
Zingiber officinale (ginger)
Pathway
zof04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
122031369
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
zof02000
]
122031369
Transporters [BR:
zof02000
]
Solute carrier family (SLC)
SLC32: Vesicular inhibitory amino acid transporter
122031369
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Aa_trans
Trp_Tyr_perm
Motif
Other DBs
NCBI-GeneID:
122031369
NCBI-ProteinID:
XP_042446422
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All DBs
Position
11A:complement(42348748..42398839)
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AA seq
647 aa
AA seq
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MEKGSSVAVMEEKDLEFLFDGSTDGEEDVEAQTENGEEEEEGDRSASIFSQQWPKSYRLP
TGICVCQMLNVGFTVVDRTSYLPTEQNRLKSTERIEGFWQLELLGEQAKRSAGRSLESSQ
TSELRSATNAVSLKQIRPTSGGKLRALDCYHRVVFVSFGQFSLQQFKNVDSPLLKEVLGS
FLLKGLLEAPYIPASDLRSLAWTPRVRPYLSVLTDIAYLCLLMAVDNDAAAEVSSLYCLQ
NPSLSLVALAAASQCLFYIEFAASYCCFITAIALCRLSLESIDTYTISASPAFGNLGPMP
SIKYSSLLSQFGQESDLRSLLLPSSICEKLESNKSVRKSLGLVSNKSASFLVEYSGEVYI
HHGCSVTQTVFNGINVLAGVGLLSTPFTVKEGGWASLVMLLCFAVVCYYTGILMKFCFES
KEDIFSYPDIGEAAFGRFGRLFVSVVLYAELYSYCVEFIILEGDNLTKIFPGASLDWAGL
HVDSIHLFGILTALIILPTVWLRDLRIISYLSAGGVISTIVIFLSVVFIGSVDGIGFHHS
GKAVKWGGLPFSIGVYGFCYSGHSVFPNIYQSMSDRTKFSRALLICFILCTLINGSFAAI
GYLMFGEATLSQLTLNLPKDSFASTVALWTTVINPFTKYPFGISLIT
NT seq
1944 nt
NT seq
+upstream
nt +downstream
nt
atggagaaggggagttcagtggcggtgatggaggagaaggacctggagtttctcttcgac
ggaagcaccgatggagaagaagacgtggaggcccagacggagaatggggaggaggaggag
gagggagatcgttcggcttcgatcttttcccagcagtggcctaaaagctacaggctgcca
acaggaatttgtgtctgtcaaatgcttaacgtaggcttcacagtggtcgaccggacgagt
tatctaccgaccgagcaaaataggctaaagtcgactgagcgaatcgaaggcttctggcaa
ctcgagttgctgggcgaacaggcgaagcgatcagcaggccgaagcctagaaagcagtcag
acgagtgaattgaggtctgcgacgaacgcagtttccttgaaacagattcgccccacctcc
ggcggcaaattgagagcactcgattgctatcatagggtggtgtttgtctcctttggacaa
tttagtctccaacaattcaagaacgtcgattctccgctgcttaaggaggtgttgggctcc
tttttgcttaaggggcttctggaagccccttatattccagctagcgatcttcgttccttg
gcgtggacacctcgtgtgcgtccctatctttcggtattaacagatatagcctacctttgt
ttgttgatggctgtcgataatgacgctgcagcagaggtctcctcgctatattgtttgcag
aacccgtctctgagcttggttgctttggcagctgctagccagtgcctgttctacattgag
ttcgccgcaagctattgttgctttatcactgctattgctctctgtcgtctgagtctggaa
agtattgatacatacacgatttctgcatcaccagcattcggaaatcttgggcctatgcct
agtattaaatactctagcttgctcagtcaatttgggcaagaatctgatttgagatcactt
cttcttcccagtagtatatgtgagaagctagaatccaataaaagcgtaaggaaatctctt
ggtttggtatcgaataagtcagcctccttcctggttgagtattctggtgaagtatacatt
catcatggatgtagtgtaactcaaacagtctttaatggaattaatgtattagctggggtt
ggccttctttctactccatttactgtgaaagagggaggatgggctagtttggtaatgtta
ctttgttttgctgtagtttgttactacactggcattcttatgaagttttgctttgagagc
aaagaagacatttttagctaccctgatattggtgaagctgcatttggaagatttggacgc
ttatttgtatctgttgtcttgtatgcggaactatattcatattgtgttgaatttattatt
ttagaaggtgataaccttactaagatctttcctggggcttctttggattgggctgggctg
catgtagattctatccatttgttcgggattttaactgctctaattattctaccaactgtt
tggctacgagaccttagaataatctcttatctatcagctggtggagttatttccactata
gtgatctttctctctgtggtcttcattggttctgtcgatgggattggattccatcattct
ggtaaagctgtgaaatggggaggcctaccattttctattggtgtgtatggcttttgttac
tccggccattcagtgtttccaaatatttaccaatcaatgtcagatcgaactaaattcagc
agagcattgttaatatgtttcattttgtgcacgttgataaatggctcgtttgccgccatt
ggatatctcatgttcggtgaagctacgttgtcccaattaacattgaacttaccaaaggat
tcatttgcctcaacagttgctttatggacaacggtgatcaatccattcaccaaatatcct
tttgggatttctttaataacttag
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