Zingiber officinale (ginger): 122031524
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Entry
122031524 CDS
T08725
Name
(RefSeq) polygalacturonase-like
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
zof
Zingiber officinale (ginger)
Pathway
zof00040
Pentose and glucuronate interconversions
zof01100
Metabolic pathways
Module
zof_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
122031524
Enzymes [BR:
zof01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
122031524
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Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Beta_helix
Motif
Other DBs
NCBI-GeneID:
122031524
NCBI-ProteinID:
XP_042446563
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Position
11A:84312050..84314025
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AA seq
429 aa
AA seq
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MALQNSFFLCILITILFQNLFFAKGACFQPSGSMHEEEEEENFNGVLRHSGSSIFSVDEF
GAKGHGSFDNRAFEKAWKRACSSNGAAVVLVPKHKTYRLKPIKFQGPCKGRVTVQIEGTL
EAPPDPSDWDRKAIEGRYWILFSTTRSLAVRGGGTIDGKGEKWWQNSCKINESLPCVAAP
TALFFKSCKNLVVENLNVKDSQQIQVNIMRCRNVRVSNLNVSAPDLSPNTDGIHVTSSRN
VLIKDSIIGTGDDCISIVSGCRRITARNIVCGPGHGISIGSLGFNQTRANVSNVLVDGAI
LKGTTNGVRIKTWQGGRGYARRIVFQNIEMQNVKNPIIIDQNYCDSEIPCSQQKNAVAVR
NVVYRNIKGTSRSEDAMTLNCSSSVPCQGVLLSNIDLVGAEGVEGNVTGVCENLRWQQIG
KVVPRLICA
NT seq
1290 nt
NT seq
+upstream
nt +downstream
nt
atggccctgcaaaactcatttttcctctgtattctgatcaccatcttgttccaaaacctg
ttcttcgccaaaggtgcctgttttcaaccttctggttcgatgcacgaagaagaagaagaa
gaaaacttcaatggtgtgttgaggcacagtggttcctcaattttttctgttgatgaattt
ggtgccaaaggacatggatcatttgataatcgggcattcgaaaaggcttggaaaagagct
tgctcttccaatggagctgctgttgttttggtgccaaagcacaagacgtacagattgaag
cctatcaaattccagggcccttgcaaggggcgtgtcacagtgcagattgaaggaacactc
gaagcaccgccggacccttcggattgggacaggaaagccatcgagggtaggtattggatc
ctctttagcaccaccagaagcctagcggttcgaggcggcgggacgatagacgggaaagga
gaaaaatggtggcaaaattcttgcaaaattaatgagtctttaccttgcgtcgccgcgccc
acggccttgttcttcaagtcatgcaagaacttggtggtggagaatctaaacgtgaaggac
agccaacaaatccaagtaaatatcatgagatgtagaaatgtcagagtttcaaacttgaac
gtctccgcgcccgatttgagcccgaacacggacgggattcatgtcaccagcagtaggaac
gtcctcataaaagatagcatcatcggaacaggagatgattgcatatcgattgtctcgggc
tgtcgacgaataactgcaagaaacatagtatgtggacctggacatggaatcagcattggc
agcttgggatttaatcagacgagggcgaatgtgtctaatgtgttggtggacggtgccata
cttaaaggcacgacaaatggtgttaggatcaagacatggcagggagggcgtggttacgcg
aggcgcattgtgttccagaacatagagatgcagaacgtgaagaaccccataataattgat
cagaactactgcgactccgagatcccttgcagtcagcagaagaatgcagtggcagtgaga
aacgtggtgtacaggaacatcaaggggacgagcaggtcggaagacgcgatgacgttgaac
tgcagcagcagcgtgccgtgtcaaggagttttgctgagcaacatcgatttggtgggcgcc
gaaggcgtcgaggggaatgtgacgggcgtgtgcgagaatttacgctggcaacagattggg
aaggttgttcccaggctgatctgtgcttga
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