Zingiber officinale (ginger): 122031669
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Entry
122031669 CDS
T08725
Name
(RefSeq) 25.3 kDa vesicle transport protein-like isoform X1
KO
K08517
vesicle transport protein SEC22
Organism
zof
Zingiber officinale (ginger)
Pathway
zof04130
SNARE interactions in vesicular transport
zof04145
Phagosome
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
122031669
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
122031669
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
zof04131
]
122031669
Membrane trafficking [BR:
zof04131
]
SNARE
VAMP, Ykt6, Sec22 (R)
Sec22
122031669
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Gene cluster
GFIT
Motif
Pfam:
Longin
Synaptobrevin
Motif
Other DBs
NCBI-GeneID:
122031669
NCBI-ProteinID:
XP_042446691
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Position
11A:93361117..93369616
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AA seq
272 aa
AA seq
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MPFRGSVSLAASSSSRCSASPSERSNSCRRWTPTRFDAVFSSSSPTSFFLAVVKMVKLTM
IARVTDGLPLAEGLDDGRDQKDADFYKQQAKLLFKNLSKGHYEASRMSIETGPYFFHYII
EGRVCYLTMCDRSYPKKLAFQYLEDLKNEFERVNGNQIETAARPYAFIKFDTFIQKTKKL
YLDTRTRRNIAKLNDELYEVHQIMTRNVQEVLGVGEKLDQVSQLSSRLTSESRIYADKAK
DLNRQAFIRKWAPVVIVLGVVMFLFFIRKKVW
NT seq
819 nt
NT seq
+upstream
nt +downstream
nt
atgccctttcgcggaagcgtttctctcgctgcttcatcctcgagtcggtgttccgcgtca
ccaagcgagcgctcgaacagctgccggcgctggactccgactcggttcgacgcagtcttt
tcgtcatcctcgccaacgagcttcttccttgcagtggttaagatggtgaagttgacaatg
atagcacgtgttactgatggcttaccattagctgaaggattggatgatggtcgtgaccag
aaagatgcagacttttataagcagcaagctaagcttttatttaagaacctgtcgaagggt
cattatgaggcttctagaatgtcaatcgagactggtccatacttcttccactacattatt
gaggggcgtgtttgttaccttacaatgtgtgatcggtcttacccaaagaagcttgctttt
caatacctggaagacctcaagaatgagtttgagagagtcaacgggaatcagatcgaaact
gccgcaagaccttatgcttttatcaagtttgatactttcatacagaagaccaagaagctt
tatttggatactcgcactcggcgaaatattgctaagctgaatgatgaactgtacgaagtc
caccaaataatgactcgcaatgtacaggaggttcttggtgttggtgaaaagttagaccag
gtgagtcaattatcaagcaggttgacgtctgagtctcgaatatacgctgataaggctaaa
gatctaaatcgacaggcttttattcgaaaatgggctcctgtcgtcattgttcttggagta
gtaatgtttctcttttttattagaaagaaagtatggtga
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