Zingiber officinale (ginger): 122031702
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Entry
122031702 CDS
T08725
Name
(RefSeq) nuclear pore complex protein NUP43-like
KO
K14305
nuclear pore complex protein Nup43
Organism
zof
Zingiber officinale (ginger)
Pathway
zof03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
122031702
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
zof03019
]
122031702
03036 Chromosome and associated proteins [BR:
zof03036
]
122031702
Messenger RNA biogenesis [BR:
zof03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
122031702
Chromosome and associated proteins [BR:
zof03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
122031702
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_EIPR1
WD40_Prp19
Motif
Other DBs
NCBI-GeneID:
122031702
NCBI-ProteinID:
XP_042446729
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Position
11A:complement(8320118..8324351)
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AA seq
379 aa
AA seq
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MAEYGDILHRLPQSKSVDAVRWLSSVSAFDRFVASAVHDPDAALPAAASAIEIHSLILAP
SADSSSREHPCLHLRSSWPSSSRISALRSSPTPYKHLAVAASTLSGSLHVLFVDPVDGSI
ESELSIPNDRSLHAGVVSAIDLLEGGRECVTVGEDGRVNLASIGESRMDYRRVYDSRGLA
SYTAVRWASPVEFATGGLGFGVQWWDPRKPGGFVSQFTSNWAQGKTTGIVHSIDIHPSRK
HICMVGGSAGTVFAWDLRYPQQPILLSGAGGPELLSDIDEVWQVQYDSHTLSSSVNSATS
AKLLPVMMCSEEGILAVLEQGEEPKRLLQEYCAINSFDIDPQNPSDVVCALEWEAVGILM
RPKAGNYASSFGRLPPSFH
NT seq
1140 nt
NT seq
+upstream
nt +downstream
nt
atggcggagtacggcgacatcctccaccgccttccgcaatcgaagtcggtcgacgccgtc
cggtggctctcctccgtctccgccttcgaccgattcgtcgcctccgccgtccatgacccg
gacgccgctctccctgccgcggcctccgccatcgagatccactccctaatcttagcccct
tccgccgattcatccagtcgagaacacccatgcctccacctccgctcctcctggccctca
tcttcccggatctccgccctccggtcctcccccactccctacaagcatctcgccgtcgcc
gcctccaccctctcgggctcgcttcacgtcctcttcgtcgacccggtggatgggtccatt
gagtccgaactatccattcccaatgaccgctctctgcacgccggcgtggtctctgccatc
gatctcctggagggtgggagggagtgcgttacggtgggtgaggacgggcgtgtgaatctg
gcgagcataggggaatcaaggatggattaccggagggtgtacgacagccgaggtctggca
tcatacactgcagttaggtgggcatcgccggtagagtttgcaaccggtggtttagggttc
ggcgtccagtggtgggatccgaggaagcccggcggattcgtatctcagttcacttctaac
tgggcacaaggaaaaactactggcatagttcattcaatagatatccatccatcacgcaag
catatatgcatggttggaggttccgctggtacagtttttgcctgggatcttcgatatcca
caacaaccaattcttctgtctggggcaggtggaccagaactgctctctgatatcgatgaa
gtttggcaagtccagtatgatagtcacactctctcttcaagtgttaactcagctacttct
gccaaactattacctgtcatgatgtgttcagaagaaggaatccttgctgttcttgaacaa
ggtgaagaaccaaaaagattgctacaggagtattgcgcgatcaattcctttgatatcgat
ccccaaaacccatcagacgttgtttgtgcactggagtgggaagccgttggcatcttgatg
cgcccgaaagcgggaaactacgcatcgagttttggtagactcccaccttcatttcattaa
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