Zingiber officinale (ginger): 122031740
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Entry
122031740 CDS
T08725
Name
(RefSeq) RNA-binding protein 25-like isoform X1
KO
K12822
RNA-binding protein 25
Organism
zof
Zingiber officinale (ginger)
Pathway
zof03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
122031740
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
zof03041
]
122031740
Spliceosome [BR:
zof03041
]
Complex A
U1 snRNP components
U1 related factors
122031740
Complex B
122031740
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PWI
RRM_1
Motif
Other DBs
NCBI-GeneID:
122031740
NCBI-ProteinID:
XP_042446772
LinkDB
All DBs
Position
11A:90971891..90981072
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AA seq
956 aa
AA seq
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MAVVSPSSSQTLDSNSDAGNQPSSASFDSAPVSLPPAASIPAPADASNTPNSIPNQAPLA
PPPPAVPSFVPSFRPLGAPPVPQYSGANSPMAQNPAFLASMGQPPSIHPPGVSTSASAMP
PGAPPGAVLPLRSGIPYQVAPGQPSAPMPYAQVGNGYMAVPPQGPMAMPPPGMPRYPAPY
PMIRPIFPPRPFPPTGVIPPMPRPPIPGIWGLPPVATPIVRPIVPVSTPMEKPQTTVYVG
KIATTVENEFLLSILTLCGPVKSWKRAQDPSDGTLKAFGFCEFESAEGVLRSLRLLSKLN
IDGQELMLNINQATREYLERYVENKAETEKQEVAQTGDPANERDSKESTEKQGQSANPME
EGTKKDSEDKENQVGNKSFGLVTDEDREFDAVALEKLTGMLEERLKSKPLPPPMLVDGTV
KSTSDTPSKSKDGDSDIDIMKGDAAEEKNDDDNMSENKPATESDKPETPDRSKRHDSRSQ
ERDRERDLKREKERELERVEREREREKVRRERERERELREVERLYKDRLKEWEAREREKE
YQRQYEKEREKERERERWKEIVRQEDESSGDDGDDSRKRRRRTSLLEEKRRKRQHEKEED
FEDRLKEKEEIAEAKRRATEEQPKLVTKQLKLESKSLDQVTPEDETAMQDENFERKHIES
SHANDVSRNGLNDVDAISGNSSGDDLNMMAPIAVSDKKQNNNAPARKLGFGLIGSGKRTT
VPSVFHEEDDEDLDEKKMRPLVPIDYSTEELQAVQANASGSQSNLAAAAEFAKRISGANP
KDAKADTDRERSRRSSGKQNLRDRDWNDDESSRSKDESREKMHNRNIDRERGREDKPKTG
NKKLLDAKQLIDMIPKTKEELFVYEINWDVYDKHHLHERMRPWISKKITEFLGEEEATLV
DYIVSCIKDHVQASTMLEMLQSILDDEAEMFVLKTWRMLIFEIKKVETGLSMKSKS
NT seq
2871 nt
NT seq
+upstream
nt +downstream
nt
atggcggtggtctccccttcttcttcccaaaccctagactcaaactccgacgccggcaac
caaccgtcctctgcctcgttcgattcggctcctgtctctcttcccccagccgcttcgatt
cctgctcctgctgacgcctccaacactccgaactcaatccctaatcaggcgccgttagct
ccgcctcctccagctgtcccatccttcgtgccttccttccggccccttggggctcctcct
gttcctcagtattctggggctaatagccccatggcgcagaaccctgctttcctcgcgtcg
atgggacagccccccagcatccatccgcctggcgtctccacctctgcctcggccatgcct
cctggagcgcctccgggcgcggttctgcctctgcggtctggtattccctaccaagttgct
cctggtcagccttcagccccgatgccgtatgcacaagttggaaatggttatatggctgta
cctcctcagggtccgatggcgatgcctcctccgggaatgccccgctatccagctccttac
ccgatgattcgccctatatttcctccacgtccatttcccccgactggtgtgattccaccg
atgcctaggcctccaattccaggtatctgggggctgccaccggtagccactcctattgtc
aggcctattgttccagtttctacaccaatggagaagccacaaactactgtttatgttggc
aagattgcaaccacagtagaaaatgaatttctcctttcaattctcacactttgtggacct
gtaaagagttggaaaagggcacaagatccttctgatggtacacttaaggcctttggattt
tgtgaatttgaatctgcagaaggagttcttcgttctttacgcttactgagcaagttgaat
atagatgggcaagaattgatgttgaacattaaccaagctactagggaatatcttgagcgt
tatgttgaaaataaagctgaaacagagaagcaggaagtagcacaaactggagatcctgca
aatgaaagggatagtaaagaaagtactgaaaagcaaggacagtctgcaaatccaatggaa
gaaggaaccaaaaaagattctgaagataaagaaaaccaagtgggaaacaagagttttggt
ctagtcacagatgaagatcgtgagtttgatgcagttgctctagaaaagcttacaggaatg
ttagaagagagattaaagagcaaaccgttgcctccacctatgctggttgatggaactgtt
aaatctacttctgacacaccttccaaatcgaaggatggggattctgatatcgatataatg
aaaggtgatgctgctgaagaaaaaaacgacgatgacaatatgagtgaaaacaaaccagca
actgaaagtgacaagcctgagactcctgatagatcaaagcggcatgatagtaggagccaa
gaacgagatagggaacgtgacctgaaacgggaaaaagaaagggagcttgagagagttgag
cgggaacgagaaagagagaaagttaggagggaaagggaaagggaaagggaattaagggaa
gtagaacggttgtacaaggaccggcttaaagaatgggaagctagagaacgagagaaagaa
taccagcgacaatatgaaaaggaacgggagaaagaaagagagcgggaacggtggaaagag
atagtgcggcaggaagatgaaagtagtggtgatgatggtgatgactcaagaaaaagaagg
cgtagaactagtttacttgaggaaaagagaagaaaaaggcagcatgaaaaggaagaggat
tttgaagacagattgaaagaaaaggaagaaattgctgaagccaagaggagggcgacagag
gaacaacctaaacttgtgacaaagcaactaaaactcgagtcaaagtcacttgatcaggtt
actccggaggatgaaactgctatgcaagatgagaattttgaacgaaagcatattgagtcc
agtcatgctaatgatgtttctagaaatggtcttaatgatgttgatgccatttctggaaac
agcagtggtgatgatctgaatatgatggcgccaattgcagtttcagacaaaaagcagaac
aataatgctccagctcggaagcttggatttgggttaattggctcaggaaaacgtactact
gtcccttcagttttccatgaagaggatgatgaggatttggatgagaaaaaaatgagacct
cttgtgccaattgattattcaactgaagaattacaggctgtccaggcaaatgcatctgga
tcacaatcaaatttggcggctgctgctgaatttgccaagcgcatatctggtgccaaccca
aaagatgcgaaggctgatacagatagggaaaggagcagacgttctagtggcaaacagaat
ttgagagatcgagattggaatgatgatgagagtagccgttcaaaagatgaaagtagggag
aagatgcataataggaatattgatcgggaaagaggcagagaagataaaccaaaaactgga
aataagaaattattggatgccaagcagttgattgatatgattccaaaaacaaaagaagaa
ctgtttgtctatgaaattaattgggatgtttatgacaagcatcacttgcatgagaggatg
agaccttggatctcaaagaagataactgagttccttggagaagaggaggccactttggtg
gactatattgtttcctgtattaaagatcacgtgcaagcatccacaatgctagaaatgctt
cagtctatattagatgatgaggcagaaatgtttgtcctcaaaacgtggaggatgctgatt
tttgaaattaagaaagttgaaacaggcttatcaatgaaatcaaagtcctag
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