Zingiber officinale (ginger): 122031743
Help
Entry
122031743 CDS
T08725
Name
(RefSeq) chaperonin CPN60-like 2, mitochondrial
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
zof
Zingiber officinale (ginger)
Pathway
zof03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
122031743
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
zof03019
]
122031743
03110 Chaperones and folding catalysts [BR:
zof03110
]
122031743
03029 Mitochondrial biogenesis [BR:
zof03029
]
122031743
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
zof04147
]
122031743
Enzymes [BR:
zof01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
122031743
Messenger RNA biogenesis [BR:
zof03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
122031743
Chaperones and folding catalysts [BR:
zof03110
]
Heat shock proteins
HSP60 / Chaperonin
122031743
Mitochondrial biogenesis [BR:
zof03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
122031743
Exosome [BR:
zof04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
122031743
Exosomal proteins of other body fluids (saliva and urine)
122031743
Exosomal proteins of breast cancer cells
122031743
Exosomal proteins of colorectal cancer cells
122031743
Exosomal proteins of bladder cancer cells
122031743
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
DUF763
Motif
Other DBs
NCBI-GeneID:
122031743
NCBI-ProteinID:
XP_042446794
LinkDB
All DBs
Position
11A:complement(96755831..96762614)
Genome browser
AA seq
578 aa
AA seq
DB search
MYRAAAAVASSALRRSSSWKQIGNGGGIVFARSYAAKDINFGAGARAAMLQGVSELAEAV
KVTMGPKGRTVIIEKNRGDVKVTKDGVTVAKSIEFKERFKNVGADLVKQVAKATNSAAGD
GTTCATVLTQAILVEGCKSVAAGVNVMDLRRGINIAVDAVISHLRKQVWMISSSEEITQV
ATISANSEREIGELIARAMDKVGKDGVITVSVGNTLENEMEVVEGMKLGRGYISPYFITD
VMTQKCELENSLILIHDKKISDMNSLLPVLEIALKTKRSLLIVSEDVVDDALAMLLLNKR
RAGLKVCAIKAPGFGENRRANLEDLAILTGGEVITEDRGLNLSKVKLEKLGTAKKVTISL
DDTIILHGGGDKKLIEERCATLRTAIEKSAALFDKEKAQERLSKLSGGVAILKIGGASEA
EVGEKKDRVKDALNAARAAVEEGVLPGGGVALLYAAKELDKIQTSNDDEKIGVQIIKNAL
KAPTLTIAENAGVDGALIVGKLLEQENLNLGYNAATGEYVDMVEAGIVDPLKVIRTALVD
AASVSVLLTTTEAAVVELPDGRSGRPVSRIPRMDDMDL
NT seq
1737 nt
NT seq
+upstream
nt +downstream
nt
atgtatcgggcagccgccgccgtcgcttcctctgcgctcaggcgatcctcgtcgtggaaa
cagattgggaatggtggtggaattgttttcgcacggagctacgctgcaaaagacataaac
tttggagcaggagctcgggctgcaatgctacaaggagtcagcgaactcgctgaggctgtt
aaggttaccatgggccccaagggtcggactgtgattattgagaaaaatcgaggagatgtg
aaagttacaaaagatggggtaaccgttgccaaaagtattgaatttaaggagagatttaaa
aatgttggtgcagatcttgtgaagcaagttgctaaggccactaactctgctgcaggagat
ggtacaacttgtgcgactgttctaactcaagcaatactagttgaaggttgcaaatcagtg
gcagcaggggttaatgtcatggacttgcgtcgtggcattaatatagcagttgatgctgtt
atttctcatttgagaaaacaagtctggatgattagtagttcagaagaaattactcaggtt
gctaccatttctgcaaatagtgaacgagaaattggtgaattgattgctagagcgatggac
aaagttggaaaagatggagtcatcactgtctctgttggaaatacattagaaaatgagatg
gaggtggtggaaggaatgaaacttggaaggggttacatatcaccatatttcattacggat
gtaatgacccaaaaatgtgagctagaaaattcactgattcttattcacgataagaagatt
tcagacatgaattctcttttaccagtattggagattgctttgaagacaaaaagatcactt
ctaattgttagtgaggatgttgtagatgatgctctagctatgctgttgctgaataagcgc
cgggctggtcttaaggtttgtgctattaaggcccctggttttggtgaaaatagacgtgcc
aatttggaggatcttgccatacttacaggaggggaggtaattacagaggatcgtggtctg
aaccttagcaaagtcaaactagaaaaacttggtacagctaaaaaggtaactatctctctt
gatgatactattattctacatggtggaggtgacaaaaaactgattgaagaaagatgtgca
acgcttagaacagcaatcgagaaaagtgcagctttgtttgataaggaaaaagcacaagaa
cgtttgtcaaagctctctggaggagtagccattcttaagattggtggagcaagcgaggct
gaagttggtgagaaaaaggacagggttaaagatgctctaaacgctgcaagggcagctgtg
gaagagggagttttaccaggtggtggggttgctctcttgtatgctgcaaaggagcttgat
aagattcaaacatccaatgatgacgagaaaattggagttcagatcattaaaaatgctcta
aaggcacctactttgactattgctgaaaatgctggtgttgatggtgcattaattgttggc
aaattgcttgaacaagagaatctgaatttaggatataatgctgctacaggtgaatacgtt
gacatggtagaggctggaatcgttgatcccctaaaggtcattagaactgcattagttgac
gctgccagtgtttccgtcttgttgacaacaactgaagcagcagttgttgagcttcctgat
gggagaagtggtcgaccagtcagccgcattccaaggatggatgacatggatttgtga
DBGET
integrated database retrieval system
