Zingiber officinale (ginger): 122031750
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Entry
122031750 CDS
T08725
Name
(RefSeq) transcription initiation factor TFIID subunit 15b-like isoform X1
KO
K13098
RNA-binding protein FUS
Organism
zof
Zingiber officinale (ginger)
Pathway
zof03015
mRNA surveillance pathway
zof03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
122031750
09122 Translation
03015 mRNA surveillance pathway
122031750
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
zof03041
]
122031750
Spliceosome [BR:
zof03041
]
Complex A
Other components
Complex A specific factors
122031750
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
Zn_ribbon_RanBP
Motif
Other DBs
NCBI-GeneID:
122031750
NCBI-ProteinID:
XP_042446805
LinkDB
All DBs
Position
11A:complement(71967120..71979497)
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AA seq
462 aa
AA seq
DB search
MSSSYGSGGPDDTAQPPRGGGYGRGRGGGGGYGGNQGNRGGSGGYGGGGGGGGYQGGDRG
NRGGGGGPRGGGRGGGVGREGDWRCPNSSCGNMNFARRVECNKCGAPCPGGGRGGGSGDS
NRGGDGGGGFNRGGGGDYNDGQGGARGSYNNRGGGYSGNRGGRSDYEGRGGDFGGRGASY
NDNNREREDDRYGQVALPPSAGYGGPGGAAGNYTPPNCYGANSAYAGDSVTPPSNYGGPN
SYPPPYGVPPPNAYSNEGSLARGGPPSSYGGPPSRHGGGYGDRGNPGRGGGAPPRHEGGA
YGAAPTDAGAQIKQCDESCGESCDNSRIYISNLPPDVTTDELRDLFGGIGQVGKLKQKRG
YKDQWPWNIKIYTDESGNNKGDAVLSYEDPAAAHSAGGFYNNYDMRGYKINVAMAEKTAL
KAAPSYDGGRGGYGGGDRRRDNYNGGGGPERHQYGGQRSRPY
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atgtcaagttcctacggctccggtggacctgatgacactgcgcagcctcctcgcggcggc
ggttacggacgaggccgtggaggcggcggcgggtacggtggaaaccaggggaatcgaggt
ggaagcggcggctacggtggcggtggcggtggcggtggctatcaaggcggagatcgtgga
aaccggggaggtggcggtggaccccgaggcggtggtcgtggtggcggagttggtcgggag
ggagattggcgatgccccaactccagttgcggaaatatgaacttcgcaagaagagtggag
tgcaacaagtgtggagctccgtgtcccggtggtgggcgtggtggtggttctggtgacagc
aacagaggaggtgatggtggcggtggtttcaatagaggtggtggtggtgattataatgat
ggtcaaggtggtgcccgtggtagttataacaaccggggcggtggatattctgggaaccgt
ggtggtagaagtgattatgaaggaagaggtggagattttgggggaagaggtgcttcttat
aatgataataatcgagagcgagaggatgacagatatggtcaagttgcactgcctccctca
gctggttatggcggtcctggtggtgctgctgggaattatactcctcccaattgttacggt
gcaaatagtgcctatgctggtgattctgttacacctcctagtaattatggtggccctaat
tcttaccctcctccatacggtgtaccccctccaaatgcatattctaatgaaggttctttg
gctcgtggtggtccaccatctagctatggcggtccaccatccagacatggtggtggatat
ggtgatcgtgggaaccctggccgtggtggtggtgctccacctcgccacgagggtggtgcg
tatggtgctgctcctactgatgctggcgctcagatcaaacaatgtgatgaaagctgtgga
gaatcttgtgataactcgaggatctacatctcaaacttgcctcctgatgtgactacagat
gagctacgtgacctttttggaggaatcggtcaggttggcaagctcaagcaaaagcgaggc
tacaaagaccagtggccttggaatataaagatatatacagatgaatctgggaataacaaa
ggagatgctgtgctctcatatgaagatcctgctgctgctcattctgccggaggcttctat
aataactacgacatgagagggtacaagattaatgttgcaatggcagagaagactgcactc
aaagcagccccttcatatgatggtggcagagggggttatggtggaggagatcgacgtaga
gataattataatggtggtggtggacctgagaggcaccagtacggcggccagcgatctcga
ccgtattag
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integrated database retrieval system
