Zingiber officinale (ginger): 122031780
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Entry
122031780 CDS
T08725
Name
(RefSeq) protein indeterminate-domain 5, chloroplastic-like isoform X1
KO
K25870
zinc finger protein IDD3/4/5/6/7/8/9/10/11/12/13
Organism
zof
Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
zof03000
]
122031780
Transcription factors [BR:
zof03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
122031780
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
C2CH-4th_BIRD-IDD
C2H2-2nd_BIRD-IDD
C2CH-3rd_BIRD-IDD
zf-C2H2
zf-C2H2_6
zf-met
zf-C2H2_jaz
zf-C2H2_4
zf-C2H2_STOP2_C
Motif
Other DBs
NCBI-GeneID:
122031780
NCBI-ProteinID:
XP_042446850
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Position
11A:complement(55491139..55494091)
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AA seq
481 aa
AA seq
DB search
MAAASSSVPFFGIRDEDEHELSKQQSTTAAAPPPGSATALAPPKKKRNQPGNPNPDAEVI
ALSPKTLMATNRFICEVCNKGFQREQNLQLHRRGHNLPWKLKQKNPKEARRRVYLCPEPS
CVHHDPSRALGDLTGIKKHFCRKHGEKKWKCDKCSKKYAVQSDWKAHSKTCGTREYRCDC
GTLFSRRDSFITHRAFCDALAQESATRLPNGIASAGVGGGGRQFYGGSAGVGGGINLDLI
SPANPPQFGQLSSTTSLFRPSQSYLSGAGSGHDFNSLIQDMHSNTTAGASSTGNLYNLSF
FSNNAGATGAGAAAANMPLPSDQFPNSRSSGGGLFPSINIKNNVPSLFVADPTEPAALSP
ALPQMSATALLQKAAQMGAAASNSRSSLLSGFVGAYHSETTQRAQLVDNERSFQTLMNSL
GGGAGAFANNLDDGSPKLHHVVGAGTPPPDNGLTRDFLGVANLSVLESEMKSAFSRRSNN
P
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atggcagcggcttcttcgtcggtacctttctttggaattagagacgaagacgagcatgag
ctcagcaagcaacagtcgacgaccgccgctgctcctccgcctggctctgctacagctttg
gctcctcccaagaagaagagaaatcagccaggaaatccaaatccggacgcggaggtgatc
gcactgtcgccgaagacgctgatggcgacgaacaggttcatctgcgaggtgtgcaacaag
gggttccagcgggagcaaaacctgcagctgcaccggcggggtcacaacctgccctggaag
ctgaagcagaagaaccccaaggaggcgcggaggcgggtgtatctctgccccgagccttcc
tgcgtccaccacgacccctcccgcgccctcggagacctcaccggcatcaagaagcacttc
tgccgcaagcacggcgagaagaagtggaagtgcgacaagtgctccaagaagtacgccgtc
cagtccgactggaaggcccactccaagacctgcggtacccgcgagtaccgctgcgactgc
ggcactctcttttccaggcgcgatagcttcatcactcacagagccttctgcgacgcgctt
gctcaagaatcggccaccaggcttcccaatggcattgcttccgccggagtcggcggcggt
gggagacaattttacggcggcagtgcgggggttggaggcggaatcaatttggaccttatt
tctccggcgaatcctccacagttcggccagttgagtagtaccacttccttgttccggccg
tcgcaatcctacctttctggagccggctccgggcacgactttaatagcttgattcaagac
atgcacagcaataccacggctggcgcttcttcgacaggaaatctttacaacctcagcttc
ttctccaacaacgctggggccaccggcgctggtgccgccgctgccaacatgcccctccct
tccgatcaatttcccaactcgaggtccagcggcggtggtcttttccccagcatcaacatc
aaaaacaacgtgccgtcactattcgtggccgatccaaccgaacccgccgctttgtcacca
gcactgccacagatgtccgccaccgcgctgcttcagaaggccgcgcaaatgggcgccgcg
gcgtcgaacagccgcagctctctgctctccggttttgtcggcgcataccattcagagacc
acccagagggcgcaattggtggacaacgagaggagcttccaaaccctaatgaattcactt
ggcggtggcgcgggggcgttcgccaataacttggacgacggcagccccaagctccaccac
gtcgtcggcgcgggaactccgccgcccgacaacgggctcacgagggacttcctcggcgtc
gccaacttaagcgtcttagaatcggagatgaaatcggctttctcgaggaggagcaacaac
ccatga
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