Zingiber officinale (ginger): 122031823
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Entry
122031823 CDS
T08725
Name
(RefSeq) uncharacterized protein LOC122031823
KO
K19022
AP-5 complex subunit beta-1
Organism
zof
Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
zof03400
]
122031823
DNA repair and recombination proteins [BR:
zof03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AP-5 complex
122031823
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP5B1_middle
AP5B1_C
DUF7661
Motif
Other DBs
NCBI-GeneID:
122031823
NCBI-ProteinID:
XP_042446928
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All DBs
Position
11A:complement(17481350..17489804)
Genome browser
AA seq
1119 aa
AA seq
DB search
MEKQPSVKQLPSPNLSPQEWESLFDDFGSGSASRRSRWLHIPLVDLALYSLLRRDFPSHL
KPLLLFFIDDFLSSPSDAPPASQALPPLIDALRSLLSSVDPSAAALRDQFMVTTVSAAIS
TLDAPLDPDSSALLEPLVEILLTVANRPNHGHDRQSRAAACECLRELETAFPCLLKDVAG
HLWVLAQAERTHVAQSYLLLLAAVVRDLVLSPGLLSSPISILSTAVPLVPFNVPGFLFSD
PAADRDCEPSEVNLREIKRVLAFLWERPQALTPSATMELVSILTSIASTLEQYVPTLGAL
LKVQFSGLIYSYHPILCHVVLMLYSGFPDAFSGEDERNIALRLALMAREAYQPLPFRLLA
LHWLLGSPRLGQRKDSIAPLAPRLYPAVFDALSLKAKKLDALARIAANLDDLEMRKKGEE
EGRGALILKFFQDGLVCVSAFQWLPPWSTETSVTFRMLHKFLIGVAPHRGDCSEECGYDF
LVDSTIFSTLQSKLVSLAMEHRGLVPVVVAFVDRLVGCKAHQSIGECLLHKLDEHLLPKL
VVDYQLTSYFPIFEKIAENNTIPPRGLLEVLTRHIATLMEKHGPDSALSLWSRGNKVLGI
CRIMLKHHHSSRVFLPLSRLLAFICQFFPDLEVRDNARIYLRMLVSIPGKKLRPMMHLGE
QPSAVPASPHSGSFFHTSSSHSEDLKSPGGISSYIFLERAIPPLVKQSWSLVLLKPSVED
NAETNKTVGIDEISVLPSHQADMENEKNIETISTSKEPFRVMDSKVTEILGILRKYFSCI
PDYRHMPAFKVKIPCILRFDSEVFNRLWGDASSTFDSEDVDTLPAMYATTVTFSSSSYGS
IPPCRIPFLLGEPLRNKLDIVPVSRNSVEQPIYHASVVVELEPREPTPGLIDVTVKANAE
NGQIISGRLQSIPVGIEDMFLKVSIPPDIEECEMPKYMYNLFHALWEACGNSENTGREIF
PLSGGKGAAAIHGTRSVKLLETHLDSLVMNIEQHLAPYVVGVVGNPLVNIVRGNGIIKDI
ICENDSECSVANDITALVPYSENVPLQLPYLEDEDIVEHHSSISKKEIGIFYIMIFLPPR
FHLLFQMEVRHSSTLVRIRTDHWPCLAYIDEFLEALFLT
NT seq
3360 nt
NT seq
+upstream
nt +downstream
nt
atggagaagcagccatcggtgaagcagctaccgtcgcccaacctctccccgcaggagtgg
gagtctctcttcgacgactttggatccggctccgcctcccgacgctccaggtggcttcat
atccccctagtcgatctcgctctctactccctcctccgccgcgatttcccttctcacctc
aagccccttctccttttcttcatcgacgacttcctctcatccccatccgacgcccctccg
gcatcccaagcactgccccctcttattgacgctctacgttccctcctctcctctgttgac
ccgtccgccgccgccctgcgcgatcagtttatggtcaccaccgtttccgctgcaatctca
accctcgacgccccacttgatcccgattcatctgctcttcttgagcccttagtcgagatc
ctcctcaccgtcgccaaccgccccaaccacggccatgaccgtcagtcccgcgccgccgct
tgcgagtgcctccgagaactcgaaaccgcctttccctgcctgctcaaagacgtcgctggg
catctttgggtcctcgcccaggccgagcgtacgcacgtcgcgcagagctacctcctctta
ctcgccgccgtcgtccgggacctcgtgctaagccccggacttctctcttctccgatttcc
atcctctccactgccgttcccctcgtgccctttaacgtccccggcttcctcttctccgat
cctgccgccgatcgcgactgtgagccctcagaggtgaatttgagggagatcaagcgagtc
ctcgcattcctctgggagcgaccgcaggctctcacgccttccgccacgatggagctggtc
tctatcttgaccagtatcgctagcacgctggagcagtacgtgccgactttgggggcactc
ctgaaggtgcagttctctggcctgatttactcctatcatccaatcctctgccatgttgtt
ctcatgctctactccggcttcccagatgccttttccggggaggacgagcgcaacattgct
ctccgcctcgcccttatggctagggaagcctaccagcccctcccatttcgtcttcttgcg
ctccactggttgcttgggtcgcctcggcttggccagcgaaaagactctattgctcctcta
gcacctagattataccctgcagtttttgatgccttgtctttgaaagctaagaagcttgat
gctttagctcgcatcgcagcaaacttggatgatctagaaatgaggaagaaaggggaggag
gaaggccgaggggctctaatattaaagtttttccaggatggtttggtatgtgtctctgct
tttcagtggcttcctccatggagcactgagacttcagtcacctttcgtatgcttcacaaa
tttttgattggagttgctccacatcgtggtgattgttcagaggaatgtgggtatgatttt
ctcgttgattctaccattttcagtactcttcagagtaaattggtaagtttggcaatggag
catcgaggcctggttcctgtagttgtcgcatttgttgatcggctggtgggatgtaaggct
caccaatccataggggagtgcttgctccacaaacttgatgaacatctgcttccaaaactt
gtggtcgactatcaattgacttcttacttccccatttttgagaagatagctgagaataat
actataccacctcgtggtttgttagaagtgctcacccgtcatattgctactctaatggaa
aaacatggtccagattctgccttgagtttgtggtctcgggggaataaagtattgggcatt
tgcagaataatgcttaaacatcaccacagctcaagagtttttcttcctttgtcacgcctt
ctagcatttatctgccaattcttcccagatttggaagttcgtgacaatgcaaggatctac
ctgcggatgcttgtctctatccctgggaagaaactgaggccgatgatgcatcttggtgaa
cagccctcagctgtgcctgcatctcctcattctggctcattttttcacacttcttctagc
cactcagaggaccttaagagtccaggtggcatttcctcttatattttccttgaaagggca
attccaccacttgtcaaacagtcatggtcattagtattgctaaaaccaagtgttgaggat
aatgctgaaacaaataaaactgttggtattgacgagatcagtgttttgccttctcaccaa
gcagatatggagaatgaaaaaaacattgagacaatcagtacgagtaaggagccattcaga
gtgatggattcaaaggtcactgagattttaggaatcctaaggaagtacttctcatgcatt
cctgactaccggcacatgcctgcattcaaggttaaaataccttgcatattaagatttgat
tctgaagtgtttaaccgtctttggggagatgcttcatctacatttgattcagaagatgtg
gataccttgcctgctatgtatgcaactactgtcacattttcttcatcatcatatggttca
attccaccttgtcgcataccatttcttcttggcgaacctttgagaaataaactagatatt
gtacctgtgagtagaaattctgtggagcaaccaatttaccatgcttcagtagtagtagaa
ctggaacccagagagccaacgccaggtcttattgatgttactgtaaaggcaaatgcagaa
aatgggcaaattatctcaggcaggctccaaagtattccagttggcattgaagacatgttt
cttaaagttagcataccacctgatatcgaagagtgtgagatgcccaagtatatgtataat
ctgtttcatgcattgtgggaagcctgtggtaattctgaaaatacaggacgggagatcttt
cctcttagtggaggaaaaggggcggcagcaattcacggcacacggtctgtgaaacttctg
gaaacccatctggattctttggtcatgaatattgagcaacacttagctccatatgttgtg
ggtgttgttggtaacccactagtgaatatagtgaggggtaatgggatcattaaagatatc
atctgtgaaaatgattctgagtgttctgttgctaatgatattactgctctggtgccatat
tctgaaaatgtacctcttcagctcccgtatcttgaggatgaggatattgtagagcaccat
tcatcaatcagtaaaaaagaaattggtattttctatatcatgatattcctaccacccagg
ttccatctccttttccagatggaagtacgccattcatccaccttggtacggataagaact
gatcattggccatgtcttgcatatattgatgaattcttggaagctctttttctgacttag
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