Zingiber officinale (ginger): 122032005
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Entry
122032005 CDS
T08725
Name
(RefSeq) NF-X1-type zinc finger protein NFXL2-like
KO
K15683
NF-X1-type zinc finger protein NFXL1
Organism
zof
Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
zof04121
]
122032005
Ubiquitin system [BR:
zof04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
NFX1 proteins
122032005
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-NF-X1
Motif
Other DBs
NCBI-GeneID:
122032005
NCBI-ProteinID:
XP_042447184
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All DBs
Position
1A:complement(127963531..127974614)
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AA seq
902 aa
AA seq
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MSYAAAAAAAGGGDRRRLPPPISSPTSDVVLSESDSNSSDDGAVRRTALEDSIFSTYLQI
SGRDSPDLTKIRTFLASAAGRGPLVSCLICLERIRPVDPVWSCASGCYALFHLVCIQSWA
QQCSHRPPSVTSPAAAASATSDWHCPKCRLSYPKTLIPRSYICFCGKVDDPPADPWILPH
SCGEVCDRPLRGECGHRCLLLCHPGPCPPCPKLVNSRCFCGSRDDVRRCAQKLFSCNKTC
SKPLPCRRHQCTERCHEGPCPPCRVRGVFSCACLKSKEERECSEREFKCDRPCTGMLQCG
KHSCDRGCHSGPCGDCPLQGRRTCPCGKKEHKGVSCDTDVPTCGSTCDKMLSCRIHRCPE
RCHCGPCVEACRSVIMKSCRCGGLKKEVPCYQDLVCERKCQQVRDCGRHTCKRRCCDGDC
PLCPEICSRKLRCNNHKCPSPCHRGVCAPCPLMVPISCSCGETRFEVPCGTEKSQRPPKC
SRPCTISRLCRHKFECRPHKCHYGACPPCRLTCGDELPCGHKCKERCHGPIPPPNPEFIL
KPTKKQLNKHLECLPGSPCSPCKEVVWVPCFGQHIGEERSMLCHSKKQFPCSNSCGNLLH
CGNHYCTKICHILNNQALTIERHGNNGSGNQEQNLWIPNDVIKQGEPCEECFLPCQKVRE
PLCPHPCPLPCHSSECPPCKVLIKRSCHCGSLVHAFECIYYNSLSGDEQQKVRSCGGPCH
RKLPNCPHLCSEICHPVECPSVYDCTKKVNARCACNSLKKEWLCRDVQKAYLNVGHDPKD
ISKSHFGVGVLPCGTICANKIKGVESDLQLRKTSEIKRDPLAEVPNVPKRKRRRERVQEV
GHVSKFQILKATIQRGIIIVLIIVAIIASAYYGHKGILWLSDWMNEVDEQRARRRGTHPR
FY
NT seq
2709 nt
NT seq
+upstream
nt +downstream
nt
atgtcttacgccgccgccgccgccgccgccggcggcggcgatcgcagacgtctccctccg
cccatctcaagtcccacatccgacgtggttctatccgaatctgactccaatagcagcgat
gacggtgctgtccgccgcaccgctctcgaggattctattttctccacttatctccagata
tccggtcgggattctccggatcttaccaagatccgaactttcctcgcctccgccgccggg
cgcggtcccctcgtctcgtgcctcatctgcctggagcgcatccgcccggttgatcctgtc
tggtcgtgtgcctctggttgttacgccctattccaccttgtttgcattcagagctgggct
cagcagtgttcccaccggccgccctctgtcacctcccccgctgctgccgcctcggcgacc
tccgattggcattgtcccaaatgtcggctttcctaccccaaaaccctaattcctagatct
tatatttgcttttgtggcaaggttgacgacccgcctgcagatccgtggatcttgccgcat
tcttgcggtgaggtctgtgatcgccccctccgcggtgagtgcggtcatcgttgtctcctg
ctgtgccaccccggtccctgtccaccctgccctaaactcgtaaactcgcgctgcttctgt
gggtctcgtgatgacgtgcgtcgttgcgcccaaaagctcttttcttgcaacaagacctgc
tccaaaccgttgccttgccggagacaccaatgcacagaaagatgtcatgagggaccttgc
ccgccatgccgggtgaggggcgtttttagctgtgcctgcttaaaatctaaagaggaaagg
gaatgctcggagagggaattcaagtgtgacagaccatgcactgggatgcttcaatgtggc
aagcactcctgtgatcgaggttgccactctggtccttgtggcgattgcccacttcaggga
agaaggacatgcccatgcggaaagaaggaacacaaaggtgtctcctgtgatacagatgtt
cctacttgtggttcaacatgtgataaaatgctgagctgcaggattcatcggtgtcccgag
agatgccactgtgggccatgcgttgaggcttgtagaagtgtcatcatgaagtcctgtaga
tgtggggggttgaagaaagaggttccttgctatcaagatttggtgtgtgagagaaagtgt
cagcaggtgagggattgtggacgtcatacatgtaagcgccgttgctgtgatggggactgc
ccactttgcccggagatctgtagcaggaagcttagatgcaacaaccataaatgtccatca
ccatgtcacaggggtgtttgtgctccttgtcccttaatggtgccaatttcatgttcatgc
ggagagactcggtttgaggtaccttgtggtacagaaaagagccaaagaccaccaaaatgt
tctagaccatgtacaatatctcgtctttgcagacacaagtttgagtgtcggccccacaag
tgccactatggagcttgcccaccatgtcgattgacatgtggtgatgaacttccatgtgga
cataaatgtaaagaaagatgtcatggaccaattcctcctccaaatccagaattcattttg
aaaccaacaaaaaaacaattaaataagcatcttgaatgcttacctggatcaccctgttct
ccatgcaaggaagtggtttgggttccatgctttggccaacatattggagaagaacgttca
atgctttgtcacagtaagaagcagtttccatgttcaaattcctgtggaaatcttcttcat
tgtggcaatcattactgcaccaagatttgtcatatacttaataatcaggcattaaccatc
gaaaggcatggaaacaatggctctggtaaccaagaacaaaatctgtggataccaaatgat
gtgattaagcagggggagccatgcgaagagtgctttcttccttgccaaaaggttagagaa
ccattgtgtccacatccttgccctctaccatgccattccagcgaatgtcctccatgcaag
gtccttattaaacgttcctgtcactgtggttccttagtgcatgcttttgagtgcatatac
tataacagcttgagtggcgatgaacaacagaaagtacgctcttgtggtggcccatgtcac
agaaagttaccaaattgtcctcacttatgttcagaaatatgccatcctgttgaatgccca
tcagtctatgactgcactaaaaaggtgaatgctcgttgtgcatgtaactctctcaagaaa
gaatggctatgtcgagatgtccaaaaagcctacttgaatgttggtcatgatccaaaagac
atctcaaaaagtcactttggtgttggtgttcttccatgtggtacaatatgtgcaaacaaa
attaaaggtgtcgaatctgacctgcaactccgaaaaactagtgagatcaagagggatcca
ttggccgaggtaccaaatgtcccaaagcgcaagagaagacgtgaacgggttcaagaagtc
ggacatgtttcaaaattccagatactcaaggcaactatacagagaggtatcatcattgtt
ctcataattgtcgcgatcattgctagtgcatattatgggcacaagggtattttgtggctc
tccgattggatgaacgaagtggatgaacaaagagcacgtagaagaggtactcatccaaga
ttctactag
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