Zingiber officinale (ginger): 122032114
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Entry
122032114 CDS
T08725
Name
(RefSeq) preprotein translocase subunit SECY, chloroplastic-like
KO
K10956
protein transport protein SEC61 subunit alpha
Organism
zof
Zingiber officinale (ginger)
Pathway
zof03060
Protein export
zof04141
Protein processing in endoplasmic reticulum
zof04145
Phagosome
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
122032114
04141 Protein processing in endoplasmic reticulum
122032114
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
122032114
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
zof04131
]
122032114
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
zof02044
]
122032114
Membrane trafficking [BR:
zof04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
SEC61 complex
122032114
Secretion system [BR:
zof02044
]
Sec (secretion) system
Eukaryotic Sec-SRP protein
122032114
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SecY
TssN
Motif
Other DBs
NCBI-GeneID:
122032114
NCBI-ProteinID:
XP_042447301
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Position
11A:complement(11841655..11846796)
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AA seq
554 aa
AA seq
DB search
MLLSARQPQSSAPHGLVFSGFYSAPPRRTSLALSRPSVVLCRASYSAAVNTEIGRGSSAW
DDLRLSSDGGTRCIKQSDLSNFDPLGLYKERTLGLGSFRENVLDFFSQTFESTSSPKKDR
SALKRGAAAAIEDSSIDIGDFFKGPLPGKFLKLLGYLALSRLGVYVPLGGVNREAFAGNL
DQNSLLSTLDSFSGGGIGRLGICSLGIVPFINAQIVFQLLTQIYPKLQDLQKREGEAGRK
KVLQYTRYASVGFAVVQAIGQVLFLRPYVNDFSTEWAVSSIVLLTLGSVFTTYIGERISD
LKLGNGTSLLIFTSIISYLPASFGRTVAQAFQDGNYLGLAAIIFSFFLLVLGIVYVQEAE
RKIPLNYASRYTTGGLQKSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGVTALKKAA
LALNPGGSLYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASVPLIRPGKSTSAFLK
TVLSRISVLGSAFLAVLAAGPSVIEQTTRLTAFRGFAGTSVLILVGCATDTARKVQAEII
SQKYKNIEFYDINQ
NT seq
1665 nt
NT seq
+upstream
nt +downstream
nt
atgctcttatccgcgcggcagccgcagagctccgctccacatggcctcgtcttctccggc
ttctattcggcaccgcctcgacgaacttcactcgccttgtcgaggcccagtgtagttctc
tgtagggcttcttactcggcggcagtgaacacagaaatcggacgaggaagttccgcttgg
gatgatctccgtttgagttccgacggagggaccaggtgcatcaaacagtctgatttgtct
aattttgaccccttgggcctttacaaggagagaactttgggccttggttcttttcgggaa
aatgttcttgatttcttttcccaaacttttgaaagcacatcaagcccaaagaaggataga
tctgccttaaaacgaggtgcagcagctgcaattgaggacagttccattgacattggggac
ttctttaagggccctctgccagggaaattcttaaagctgttagggtatttagctttatct
cgtcttggagtgtatgtgccactaggtggagtgaatcgcgaagcttttgctggtaacttg
gatcaaaacagtctattaagcaccttggattctttctctggtggtggaattggtagattg
ggcatctgctctttgggtattgttccatttatcaatgcacaaattgttttccagcttctt
acccagatctatccaaagctacaagacctccagaaaagagagggtgaagctggaaggaag
aaggttcttcagtatacacgctatgcttctgtaggttttgcagtggttcaggctattggg
caagtacttttcctccgtccatatgtcaacgacttcagtacagaatgggcggtatcatca
attgtgctgttgacccttggatcggtattcacaacttacataggggaaagaatatccgac
ctcaaactcggaaatggaacatcccttttgatatttactagcataatatcctacttgccc
gcatcatttggcagaacagttgcacaagcttttcaggatgggaattaccttggactagca
gcaattatcttttcattttttctattggttcttggtatcgtatatgttcaggaagcagaa
agaaagattccactcaactatgcgtcgagatacacaactgggggccttcaaaaatctgca
tatcttccgttcaaggtaaatagctctggggtgatgccgataatattttcaacttcttcc
ttggctttacctggcactttggcgcgcttcactggtgtaactgctcttaagaaggcagcc
cttgctttgaaccctggaggttccttgtatcttcccaccaacatactgcttatcgccttt
ttcaactactactatacttttctacaattggatcctgatgatgtgagtgagcagttgaaa
cgccaaggagcatcagtacctctaattcgacctgggaaaagcacatctgcttttctcaaa
actgttcttagccggatatcagttctgggttcagcatttctggcagtgctagccgccggt
ccttctgtgatcgaacaaactacacgcttgactgctttccgtggatttgctggtacatcc
gttctcattctcgtcggatgtgcgaccgatacagcaagaaaagttcaggcagaaataatt
tcccaaaagtacaaaaacatcgagttctatgatatcaaccagtag
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