Zingiber officinale (ginger): 122032401
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Entry
122032401 CDS
T08725
Name
(RefSeq) polygalacturonase-like
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
zof
Zingiber officinale (ginger)
Pathway
zof00040
Pentose and glucuronate interconversions
zof01100
Metabolic pathways
Module
zof_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
122032401
Enzymes [BR:
zof01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
122032401
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Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
NosD
Beta_helix
Motif
Other DBs
NCBI-GeneID:
122032401
NCBI-ProteinID:
XP_042447625
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Position
11A:70193469..70195157
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AA seq
387 aa
AA seq
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MAELKVITIVLLLALVLCSRPVEAVFNIADYGAKSDGQTDSAGALLSAWQAACRSTGAAT
VYVPAGSFLVRRGEFSGPCESSKITFQIDGTLVAPSGYGTAGEWLLFDHVEGVEVYGGTI
DGRGSSLWACKAGSHGCPAGVSSLVFRNSKGITVSGLTSVNSELYHMVIDNCEGVTMQGV
RITAPGSSPNTDGIHVQGSSHVTITGAGIKTGDDCISIGPGTTDLWIEQVNCGPGHGISI
GSLGKGYDEAGVENVTVKTSVFAGTTNGLRIKTWGRPSEGFVRGVVFEHSVMQDVQNPII
IDQNYCPDDKGCPDQSSGVKISEVTYNDIHGSSASQVAVKFECSPSNPCTGIWLQDIKLT
YGNTPAESSCEHADGSASGFVVPPSCL
NT seq
1164 nt
NT seq
+upstream
nt +downstream
nt
atggctgagctcaaggtgattaccattgttctactcctcgcactcgtcctctgttctcgg
cctgttgaagccgttttcaacatcgccgactacggcgccaagtccgacggtcaaacggac
tccgccggcgctttgctcagcgcgtggcaggccgcctgccgctcgaccggcgcggccacg
gtctacgtgccggctggctcattcttagtccggcgaggggaattcagcgggccctgcgag
agcagcaagatcacgttccagatagacggcaccctcgtcgcgccgtcgggctatggcacc
gccggagagtggctcctgttcgaccacgtggagggcgtggaggtctacggcggcaccatc
gacggccgcggctcgtccttgtgggcgtgcaaggccggcagccacggttgccccgcaggc
gtctcctcgttggtgtttaggaactcgaagggcatcaccgtcagcggactgacgtcggtg
aacagcgagctgtaccacatggtgatcgacaactgcgagggagtgacaatgcagggcgtg
aggataacggctccggggagcagccccaacaccgacggaatccacgtgcaggggtcgagc
cacgtgaccatcaccggcgccggcatcaaaaccggagacgattgcatctccatcgggccc
ggcaccaccgacctctggatcgagcaggtcaactgcggccccggacacggcataagtatt
gggagtttggggaaggggtacgatgaggccggagtggagaacgtgacggtgaagacgtca
gtgttcgccggaacgacgaacgggctgagaataaagacgtgggggcggccgagcgagggg
ttcgtgaggggggtggtgttcgagcactccgtgatgcaggacgtgcagaacccgatcatc
atcgaccagaactactgccccgacgacaaaggatgccctgaccaaagttcgggggtgaag
ataagcgaggtgacgtacaacgacatccatgggtcgtcggcgtcgcaggtggcggttaag
ttcgagtgcagcccgagcaatccgtgcaccggaatctggttgcaggacatcaagctcacg
tatgggaacacgccagcggagtcgtcctgcgagcacgccgatggatctgcttccggcttc
gtcgtgccgcccagttgtctctga
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