Zingiber officinale (ginger): 122032446
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Entry
122032446 CDS
T08725
Name
(RefSeq) uncharacterized protein LOC122032446
KO
K20523
SH3 domain-containing YSC84-like protein 1
Organism
zof
Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
zof04131
]
122032446
Membrane trafficking [BR:
zof04131
]
Others
Actin-binding proteins
Nucleation-promoting factors (NPFs)
122032446
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ysc84
FYVE
FYVE_2
Motif
Other DBs
NCBI-GeneID:
122032446
NCBI-ProteinID:
XP_042447668
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All DBs
Position
11A:complement(82896900..82900066)
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AA seq
481 aa
AA seq
DB search
MVTTEFNEKSSYSSLSKLDLGSYHDKENGSYLVDPDKGASWLRLPKHDCLFQSSSDDFLD
QGNQSQNSFHRTQPSQLRANPEVNLKNVLNGLYSILVGRNQADSASQPQLTSGSDESPSS
DISFFGVGPNGDSFLHRSVCVPSAPPFDVEAINCDTFKDMLEADPPEWIPDSYSRVCMQC
DSPFTVITRGRHHCRFCGCIFCRECTKGRCLLPVKFRERNPQRVCDSCYDRLDPLQSILI
VSNSNSVQSAKHDVTDWTCMRGWLNFPVGMSMEYEIYKATNTLRSYCQVARLDPEKSIPW
VILKGAKGLAILTVIKAGALLTYKVGTGLVVSRRVDGSWSAPSAILSIGLGWGAQMGGEL
TDFIIVLHGSRTVKAFSSNMHVSVGAGLSAAAGPVGRVFEADVRASSKGSGMCYTYSCSK
GAFVGVSLESNFVATRTETNLRFYGDPYLTTNDILFGTVKRPTAAEPLYLALNGLYSKLS
S
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atggtgacaacggaatttaacgaaaaatcttcatactcctcactgtcaaagctagatttg
ggtagttaccatgacaaagagaatggaagctacttggttgatcctgataagggcgcttca
tggctgagattgccaaaacatgattgtctattccaatcatcatcagatgactttctcgac
caaggcaatcaaagtcagaactccttccacagaacccaacccagccaactcagagctaat
cctgaagtgaacttgaagaatgttttgaatgggttatattcaattcttgtgggacgaaac
caagcagatagtgccagtcaacctcagctaacctctggttcagatgaatccccaagctca
gacatatcatttttcggtgtaggaccaaatggggatagttttttgcatcgatcagtttgt
gtgccaagtgcaccaccatttgatgtagaagctattaactgtgatacattcaaagatatg
cttgaggcagatccgcccgaatggattcctgatagttattcaagagtctgcatgcaatgc
gattcccctttcacagtcatcacccgaggaagacatcactgtcgtttttgcggttgtata
ttttgcagagaatgtacaaaaggaaggtgcttgttaccagtcaaattccgagaacgaaat
cctcaaagagtctgtgattcttgctatgacaggcttgatcctttgcagagcatactgatt
gtctcaaacagtaattctgtgcaatcagctaaacatgatgttactgactggacatgcatg
agaggatggttaaattttcctgtcggcatgtctatggagtatgaaatatacaaggccaca
aataccttgaggagttattgtcaggttgctaggttagatcctgagaaatcaattccctgg
gttatccttaaaggagcaaaaggacttgccatactgacagtaattaaagctggtgcactt
cttacttacaaggtgggtactggtcttgtagtttctcgaagagttgatggatcatggtct
gcgccatctgccattctatctattggtcttggatggggagcacagatgggaggcgagctt
acggatttcatcattgtgcttcatggctctagaactgtcaaagcatttagcagcaacatg
catgtctcagtgggtgcaggcttgagtgctgctgcaggaccagtagggagagtgtttgaa
gcagacgtcagagctagtagtaaagggtctggcatgtgttatacatacagttgtagcaaa
ggtgcttttgttggagtttcactcgaaagcaacttcgtagcaaccaggaccgagactaac
ttgcgcttctatggcgatccttacctgactacaaatgacattctctttgggacagtgaag
aggcctacagctgctgagcccttgtacttggcattgaatggcttgtactcaaaactaagt
agttag
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