Zingiber officinale (ginger): 122032553
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Entry
122032553 CDS
T08725
Name
(RefSeq) eukaryotic translation initiation factor-like
KO
K03260
translation initiation factor 4G
Organism
zof
Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
zof03019
]
122032553
03012 Translation factors [BR:
zof03012
]
122032553
Messenger RNA biogenesis [BR:
zof03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
122032553
mRNA cycle factors
Stress granule specific factors
122032553
Translation factors [BR:
zof03012
]
Eukaryotic type
Initiation factors
eIF-4
122032553
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MIF4G
MA3
Motif
Other DBs
NCBI-GeneID:
122032553
NCBI-ProteinID:
XP_042447797
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Position
11A:complement(85962507..85968072)
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AA seq
784 aa
AA seq
DB search
MIHGDMQLDPTVISLRPGGGNRVGRIFANRFDSAASGAIDSSNLPVLRPLGGAGVGLSLT
IGDSRFESRECIRYTTQQLLQLREAARITDDILKLKQEIEAEFFPEGRTWGHRDANLVSQ
SQNHNFELDSRDWRDRSRQSTTHINERSWDTLREHKESITLNSRHQEISQFNKQGSQYAS
STAMAGPTTLLKAEVPWSARRGNLSDKDRVLKTVKGILNKLTPEKFDVLKGQLIDAGITT
PDILMDVITLIFEKAVFEPTFCPMYAQLCFDLNEKLDTFPPEEGGGKEITFKRVLLNNCQ
EAFEGADNLRAEVRKLTGPDQEMERKDKERMLKLRTLGNIRLIGELLKQKMLPEKIIHHI
AQELLGQDGKTFPAEENVEAICQLFNTIGKQLDESPKSRRFNDAYFNRLKELTRNPQLAP
RLRFAVRDVLDLRVNSWIPRREEVKAKTISEIHSEAEKNLGLRPGATASLRNNRESGALG
GTGLTGFPNNIRGTGGMMPGMPGMRKMPGMPGLDKDHWEVPRSTSMQRGKANRGHGPLVA
NSPSSNSKFLPQGSGSTISGKTSAFLKGSGMPPSTSPLVSGRSDSRDQRVVSTRPVVQIS
HPMLQEKPLSTSKFNPNELRKKTVALLEEYFHIKILDEALQCVKELKSPEYHPEVVKEAI
NIALDKGPSCLDPLVKLLEYLIHKKVLTPRNLGTGCLLYGATLDDVGIDLPKAPSHFGEV
IGQLLLFSRVDFKVVEETLKKVGDSSFQSAIFDAVLKTLKSSPSGQVILNAQAAGVKVCE
ELLE
NT seq
2355 nt
NT seq
+upstream
nt +downstream
nt
atgattcacggagatatgcagctggatcccaccgtgatcagcttgaggcccggcggcgga
aatcgagtcggcagaattttcgcgaatcgattcgactctgcggcctctggagccattgat
tcctccaatctccccgtccttcgcccccttggcggcgctggcgtgggcctttcgctcacg
attggagattcaagatttgaaagccgtgaatgcattcgttacactactcagcaacttcta
caacttcgtgaggctgctcggatcacagatgatattttgaaactcaagcaggagatagag
gcagaattttttcctgaaggtcgaacttggggtcatcgtgacgctaatctggtaagtcaa
tcacagaatcacaattttgagctggacagtcgggattggcgtgatcgttctaggcaatct
actacacatataaatgaaaggtcttgggatacactacgcgagcataaagaatcaattaca
ttgaactccagacaccaagaaataagccaattcaataagcagggttctcaatatgcttct
tctactgcaatggcgggacctactactttactcaaggctgaagtcccatggtctgctcga
agaggcaatctcagtgacaaggatcgggttttaaaaacagtcaaaggtatactgaacaag
ctaacgccagaaaaattcgatgttctcaaaggccaattgattgatgctggaattacgaca
cctgatattctcatggatgtcattactctcatttttgagaaagctgtatttgagccaaca
ttctgtcctatgtatgctcaactgtgttttgatttgaatgaaaagcttgatacatttcct
cctgaagaaggaggtgggaaggagatcacattcaagcgtgtgctcttaaataattgccaa
gaggcatttgaaggcgctgacaacctgagggctgaagtgagaaaattgactgggcctgac
caagaaatggaacgcaaggataaagagagaatgctgaagctccgtacgcttggtaacatt
cgtctgattggtgagcttttaaagcagaaaatgttgcctgagaaaataattcatcatata
gctcaggagcttctggggcaagatgggaaaacctttccagctgaggaaaatgttgaggca
atttgccagttatttaatacaataggtaaacagctagatgagagcccaaagtctcgtcga
tttaatgatgcctatttcaaccggctgaaagaactaactagaaatccacaacttgcacca
cggctaagatttgcggttcgtgacgtgctcgaccttcgtgtaaacagttggatccctcgt
cgtgaagaggtcaaggccaaaaccataagtgaaattcattcagaagcagaaaaaaatctt
gggttacgtcctggtgcaactgcaagtttgagaaataaccgtgagagtggtgctttaggg
ggtacgggtcttactgggtttcctaacaacatacgtggaactggtggtatgatgcctggt
atgcctggaatgagaaagatgcctggaatgcctggtttagacaaggatcactgggaagtt
ccacgcagcacgtccatgcaaagaggtaaagctaaccgtggccatggtccattggttgct
aattcaccttccagcaactctaagttcttacctcaaggtagtggtagcactatctccgga
aagactagtgcatttttgaagggcagtggcatgccaccttctacttctccccttgtctca
ggcagatcagattcccgagatcaaagagtagtgtccacaaggcctgttgttcaaatatca
catccaatgcttcaagaaaagccattatcaacatcaaaattcaatcctaatgagctacga
aagaaaacagttgctcttctggaagagtattttcacatcaagattctagatgaggcactt
caatgcgtcaaggaattgaagagtccagaataccatcctgaagttgttaaggaagccata
aacatagctctggacaaaggcccttcatgtttggatccactagtgaagcttttggagtac
ttgatacataagaaagtgcttactccaaggaatttggggacaggttgtttactttacggg
gcaactctggatgatgtcggcattgatttgccaaaagccccttcccattttggtgaagtt
attggtcaactgcttctattcagcagagttgacttcaaagtagtggaagaaactctcaag
aaggtaggagattccagttttcagtctgcaatttttgacgctgtgctgaaaactcttaaa
tcaagccctagtggccaggtcatattaaatgcacaagcagcaggcgtgaaggtttgcgag
gaattgttagaatga
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