KEGG   Zingiber officinale (ginger): 122032742
Entry
122032742         CDS       T08725                                 
Name
(RefSeq) protein RRP6-like 2
  KO
K12591  exosome complex exonuclease RRP6 [EC:3.1.13.-]
Organism
zof  Zingiber officinale (ginger)
Pathway
zof03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:zof00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    122032742
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:zof03019]
    122032742
Messenger RNA biogenesis [BR:zof03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Exosome cofactors
     122032742
SSDB
Motif
Pfam: DNA_pol_A_exo1 HRDC MACPF_D3
Other DBs
NCBI-GeneID: 122032742
NCBI-ProteinID: XP_042447991
LinkDB
Position
11A:95290897..95296172
AA seq 546 aa
MGEEPTSSSPLKEEADSRRAVVSGPLAYSGESLHFFNNFGDFKSSLKGIGESESFSRGIA
ALDTILGIKKPPRFPEDLDDASASLAVLEDEFLCRLAISMDEFKRSREEKEAEGAKDETV
SASGSSVNVTTKDKRMIAVPPRVPFHIPTIPRPQDVYKIRVNNNNLPFDHVWLDTGDGNM
IHPLLKLSVADFVDRKSESEPVEPLHLESTPFKLVETWNDFEMVVAKLRHVDELAVDLEH
NHYRSFQGLTCLMQISTRDEDFVIDTLKLRIYIGMYLREIFKDPSKRKVMHGADRDIIWL
QRDFGIYICNLFDTGQASRVLQMERNSLEYLLRHFCGVEANKDYQTADWRLRPIPHEMLK
YAREDTHYLLYIYDHMKRILLAESSDGNDLILEVYKRSSTICLQLYKKEIFTNTSFLNIY
GLRDADLNATQLAVVSALYQWRDYIAREQDESTGYILPNKTLIEIAKQMPPLPGALIPLV
MFKHPVVEQHLSTVIEIIKNSIGNAFSFEMIARQLKLERIEAQVEQIRQMRLRASSPSGN
IRMPYH
NT seq 1641 nt   +upstreamnt  +downstreamnt
atgggcgaagaaccgacctccagctccccactgaaggaagaggcggacagtcgacgagcg
gtggtctccggacccctcgcttactccggtgagtccttgcatttctttaacaactttggt
gacttcaagtcctctctgaagggaatcggggaatctgagtccttctcgaggggtatcgct
gcattggatactattttggggatcaagaagcctccaaggttccctgaggatcttgacgat
gcctctgcctcgctagctgtcctcgaggacgagtttctttgtcgtcttgcgatctctatg
gacgagttcaagaggtcgagggaggaaaaggaagcagagggtgcgaaagatgagaccgtc
tctgcatcaggctcttctgtcaatgtgaccacgaaggataagaggatgatagcggttcct
ccgagggtaccatttcacattcccaccattccgcgtccacaggacgtatataaaatacga
gtgaataacaataacctgccgtttgatcatgtgtggttggacacgggcgatggaaatatg
attcatccactgctgaagttatctgttgcagactttgttgatagaaaatctgaaagtgaa
ccggtagaaccgcttcatctcgagtctaccccatttaagctggtggaaacttggaatgac
ttcgaaatggtagttgctaagcttcggcatgtagatgaattggcggtggatttagaacac
aatcattacagatcatttcaggggctaacctgtctgatgcaaatatctacaagagatgaa
gactttgtaattgacaccctcaagttacgaatatatattggaatgtacttgagggaaatt
ttcaaggacccttccaagagaaaggtaatgcatggggctgatcgtgacatcatatggttg
caacgggattttggcatatatatatgcaacctttttgatactggacaggcatcaagggta
ttgcaaatggaaagaaatagtttggagtatcttttgcgtcacttctgtggagttgaggca
aacaaggactaccagactgctgattggagattacgccctattccacatgaaatgctcaag
tatgctagagaagatacacattaccttctatatatatatgaccatatgaaaagaatattg
ttagctgaatcctcagatggaaatgatcttatattggaggtctacaagcgtagtagtaca
atctgcttgcaactttacaagaaagaaatttttactaatacatcatttcttaacatttat
gggttgcgagatgctgatttaaatgctacgcagcttgctgttgtttctgctctttatcag
tggagagactatattgcacgtgaacaggatgagagtactggctacatattacccaataaa
accctaattgagattgcaaagcagatgcctcctcttcctggagcattgattccgctggtg
atgtttaaacacccagtagttgaacagcatctgagtacagtcattgaaattataaagaat
tcaatcggtaatgctttttcttttgagatgatcgcaagacaactaaagctggagcgaatc
gaagcacaagtggagcaaattagacagatgcggcttcgagcttcctctccttcaggcaac
ataaggatgccataccattga

DBGET integrated database retrieval system