Zingiber officinale (ginger): 122032896
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Entry
122032896 CDS
T08725
Name
(RefSeq) luminal-binding protein 3-like
KO
K09490
endoplasmic reticulum chaperone BiP [EC:
3.6.4.10
]
Organism
zof
Zingiber officinale (ginger)
Pathway
zof03060
Protein export
zof04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
122032896
04141 Protein processing in endoplasmic reticulum
122032896
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
zof03110
]
122032896
04131 Membrane trafficking [BR:
zof04131
]
122032896
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
zof04147
]
122032896
Enzymes [BR:
zof01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.4 Acting on acid anhydrides to facilitate cellular and subcellular movement
3.6.4.10 non-chaperonin molecular chaperone ATPase
122032896
Chaperones and folding catalysts [BR:
zof03110
]
Heat shock proteins
HSP70 / DNAK
122032896
Membrane trafficking [BR:
zof04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
ER-Golgi intermediate compartment (ERGIC) proteins
122032896
Autophagy
ER-phagy
ER stress-related proteins
122032896
Exosome [BR:
zof04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
122032896
Exosomal proteins of other body fluids (saliva and urine)
122032896
Exosomal proteins of colorectal cancer cells
122032896
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HSP70
MreB_Mbl
Hydantoinase_A
FGGY_C
DDR
FtsA
Radial_spoke_3
Rep_OBD
Motif
Other DBs
NCBI-GeneID:
122032896
NCBI-ProteinID:
XP_042448144
LinkDB
All DBs
Position
11A:complement(12241754..12245324)
Genome browser
AA seq
666 aa
AA seq
DB search
MASSLRNRGSFILLGLLIAGSLFAFSIAKEEASKLGTVIGIDLGTTYSCVGVYKNGHVEI
IANDQGNRITPSWVAFTDSERLIGEAAKNQAAVNAERTIFDVKRLIGRKFEDKEVQKDMK
LVPYKIVNKDGKPYIEVKIKDGETKVFSPEEISAMILVKMKETAEAFLGKKIKDAVVTVP
AYFNDAQRQATKDAGVIAGLNVARIINEPTAAAIAYGLDKKGGEKNILVFDLGGGTFDVS
ILTIDNGVFEVLATNGDTHLGGEDFDQRIMEYFIKLIKKKHGKDISKDNRALGKLRRESE
RAKRALSNQHQVRVEIESLYDGLDFSEPLTRARFEELNNDLFRKTMGPVKKAMEDAGLDK
HQIDEIVLVGGSTRIPKVQQLLKDYFDGKEPNKGVNPDEAVAFGAAVQGSILSGEGGEET
KDILLLDVAALTLGIETVGGVMTKLIPRNTVIPTKKSQVFTTYQDQQTTVSIQVFEGERS
LTKDCRLLGKFDLNGIPSAPRGTPQIEVTFELDANGILNVKAEDKGTGKSEKITITNEKG
RLSQEEIDRMVREAEEFAEEDKKVKDRIDARNHLETYVYNMKNTINEKDKLADKLESEEK
EKIEAALKDALEWLDDNQSAEKEDYDEKLKEVEAVCNPIISAVYQRSGGAPGGSAEDDED
DSHDEL
NT seq
2001 nt
NT seq
+upstream
nt +downstream
nt
atggcttcatcgctgcggaatcgcgggtccttcatcctgttgggactcttaatcgctggg
tctttgtttgcattctcgatcgctaaagaagaagcctccaagttgggaacagttattggg
attgatcttgggaccacctactcttgtgttggtgtctacaagaatggtcacgttgagatc
attgccaacgaccaaggaaaccgcatcacgccatcttgggtggctttcactgattctgag
agattgatcggtgaggctgcaaagaatcaggcagctgtgaatgcagaaagaactatattt
gatgtcaaaaggctcattggaagaaaatttgaggataaggaagttcagaaggacatgaaa
cttgtcccctacaaaatagtcaacaaggatggtaaaccttatatcgaagtcaaaatcaag
gatggggaaactaaagtttttagtcctgaggagataagtgcaatgattttagttaagatg
aaggagacagcagaagcttttcttggaaagaaaattaaagatgctgtggttactgttcct
gcttatttcaatgacgcccaaagacaggcaaccaaagatgctggcgtaattgctggcttg
aatgtggccagaataatcaacgaaccaacggctgctgcaattgcatatggcctggacaag
aagggtggtgagaagaacattcttgttttcgaccttggtggtgggacattcgatgttagt
atcttgacaattgataatggagttttcgaagttctggcaacaaatggtgatactcatttg
ggaggtgaggactttgatcagcgaataatggaatatttcatcaaattgatcaagaagaag
cacggaaaggatatcagcaaggacaatcgcgctctcgggaaactgaggagggagagtgaa
cgtgctaagagagctttgagtaaccagcaccaagtccgtgttgagatcgaatcactctat
gacggcttggatttctcagagccgctaactcgtgcccgtttcgaagaattgaacaacgat
ctattcaggaagaccatggggccagtgaagaaagcaatggaagatgcaggactggacaag
catcaaattgacgagattgttcttgtcggtggcagcactagaattcccaaggtgcaacaa
cttctcaaggactacttcgacggcaaagagccaaacaagggggttaaccctgatgaagcg
gttgcatttggtgcagccgtgcaaggaagcattctcagtggagaaggtggtgaagaaacc
aaagatattcttctgctcgatgttgctgcccttacccttggcattgaaactgttggcgga
gtgatgactaagttgattccaaggaatacagtcatcccaaccaagaagtctcaagttttc
acaacttaccaggatcaacaaactactgtctccattcaggttttcgagggggagagaagc
ctcacaaaggactgcaggctgcttggaaaatttgatctgaatggaattccatcagcacca
agaggcacaccacagattgaagtcactttcgagcttgatgccaatggcattctgaatgtg
aaggcagaagataagggcactggcaagtcggagaagatcaccatcaccaacgaaaagggt
cgcctcagccaggaagaaattgatcgaatggttcgcgaggcagaggagttcgctgaggag
gacaagaaggtgaaggacaggattgatgcccggaaccatttggagacttatgtgtacaac
atgaagaacaccatcaatgagaaagacaagctcgccgataagcttgagagcgaagagaag
gagaaaatagaggcagccctgaaggatgccctcgagtggctcgacgacaaccagagtgct
gaaaaagaggactacgatgagaagctcaaggaggtggaagctgtttgcaaccccatcatt
tctgcagtgtatcagagatctggtggtgcgccaggaggcagtgccgaggatgatgaagat
gactcgcacgacgagctctaa
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