Zingiber officinale (ginger): 122032942
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Entry
122032942 CDS
T08725
Name
(RefSeq) chloride channel protein CLC-d-like isoform X1
KO
K05016
chloride channel 7
Organism
zof
Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
zof01009
]
122032942
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
zof04131
]
122032942
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
zof04040
]
122032942
Protein phosphatases and associated proteins [BR:
zof01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
122032942
Membrane trafficking [BR:
zof04131
]
Endosome - Lysosome transport
Others
Lysosomal membrane proteins
122032942
Ion channels [BR:
zof04040
]
Chloride channels
Chloride channel (CLC)
122032942
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Voltage_CLC
CBS
Motif
Other DBs
NCBI-GeneID:
122032942
NCBI-ProteinID:
XP_042448189
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All DBs
Position
11A:complement(65533858..65554510)
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AA seq
791 aa
AA seq
DB search
MLSNHLQNGIETAKLVWSRLPSSEDGAAAEVEFANRSNDGVGSESLDYEVIENHAYREQQ
AQRGTLWVSYYVVLRWLFSLLIGIGTALAAVFINLAVENFSGWKYAATFSIIQHSYFAGF
LVFILFNLGLVLSSVFIVTKFAPAAAGSGIPEIKGYLNGVDTPGILLFRTLIGKIFGSIG
SVGGGLALGKEGPLVHTGACIASLLGQGGTKKYHLSSKWVRIFESDRDRRDLVTCGCAAG
VAAAFRAPVGGVLFEFYEVTSWWRSQLMWRVFFTSAVVAVVVRSAMNWCKSGKCGHFGSG
GFIIWDISGGQEDYSFQEFLPMAIIGVIGGLLGALFNQLTLYITSWRRNSLHKKGNRVKI
LEVCIISLVTSAISFGLPLLRRCSQCPDSEGIECPRPPGTDGNFVNFHCTKDREYNDLAT
IFFNTQDDAIRNLFSAKTFHEYSAQSLVIFLVMFYSLAVVTFGTAVPAGQFVPGIMIGST
YGRLVGMFVVKFYQKLNVEEGTYALLGAASFLGGSMRMTVSLCVIMVEITNNLQLLPLIM
LVLLISKSVGDFFNKGLYEEQAQLKGIPLLESRPKLYMRNMTVREVCKNQKVVSIARIAK
VGEIISVLRSTKHNGFPVVDQGYNGETHVIGLILRSHLLVLLQSKLDFQNNPFPCEMRGI
SNRHLSDFVKPISSKGMSIEEIHLSEDEMELYLDLAPFLNPCPYIVPEDMSLAKVYNLFR
QLGLRHIFVVPRPSRVMGLITRKDLLVEESDSSATVELQSTSVRDQHQDRRANGRHTHLE
HPLLDSLLVQE
NT seq
2376 nt
NT seq
+upstream
nt +downstream
nt
atgctgtcgaatcaccttcagaacgggatcgagacggccaagctcgtctggtcccgcctc
ccgagctccgaggatggcgctgctgccgaggtcgaatttgctaaccggagcaacgacggc
gtcggctccgagagcctcgattatgaggtcatcgagaatcacgcctaccgggaacagcag
gcgcagagaggaacgctctgggtttcgtattatgtagtcctcagatggttgttctctcta
ctgattggcatcggtactgctttggctgctgttttcattaatctagctgttgaaaacttt
tcgggctggaaatatgctgcaactttctctataatacagcattcatattttgctggcttt
ttggtgttcatattattcaacttgggtcttgttttatcttctgttttcattgtgacaaag
tttgcaccagcagctgcaggctctggtataccagagattaagggttacttaaatggagtt
gatacacctggaattcttcttttcagaactttgatcgggaagatttttggaagtattggc
tctgtgggaggtggacttgctctgggtaaagaaggaccactggttcatactggtgcttgt
attgcttctcttctcggacaaggtggaaccaagaagtaccacttaagttcaaagtgggta
cggatttttgagagtgatcgtgatcggcgtgatcttgtgacatgtggatgtgcggctggg
gttgctgctgcttttagagctccagttggcggtgtattgtttgaattttatgaagttaca
tcatggtggagaagtcagcttatgtggagagtgttctttacatcggctgttgtggctgtg
gtggtaagatcggcaatgaactggtgcaagagtgggaaatgtggacattttggttctggt
ggcttcattatctgggacatatcaggtggtcaagaagactactcttttcaggaatttctt
cctatggctattattggggtgattggtggtcttctaggagccctatttaatcaacttaca
ctttatataacaagttggcgcagaaattctttacataagaagggaaacagagtcaagatt
ttggaagtttgcataatatcccttgtaacctctgctatctcttttggcttaccacttcta
agaagatgtagccaatgccctgattcagagggcattgaatgcccccgcccacctgggaca
gatggaaatttcgtgaattttcactgcactaaggatagagaatacaatgatttggcaaca
atcttcttcaatacacaggatgatgctatacgaaatttatttagtgcaaaaacattccat
gagtacagtgcgcaaagccttgtcatctttttggttatgttttattccctggcagtggtg
acatttgggactgctgttccagctggacaatttgtgccgggtataatgatcggatcaact
tatggacgtcttgtaggaatgtttgtggtcaaattctaccaaaaactaaatgttgaggaa
ggaacatatgctctacttggcgctgcttcttttcttggtggttccatgcggatgactgtt
tctttatgtgtcattatggttgaaattacaaataacttacagctcttaccccttatcatg
ctggttcttctaatatcaaagtctgttggtgatttttttaataaaggcctatatgaagaa
caagctcagttgaaaggcattcccttacttgaatctcgaccaaagctttatatgcgtaac
atgacagttagggaggtctgcaagaatcaaaaggttgtgtccatcgcccgcatagctaaa
gttggggaaattatttcagtgttgcgtagcaccaagcacaatggcttcccagtggtagac
caagggtataatggcgagacacatgttattggtctcattcttcgcagccatttattggta
cttctacaatctaagctggattttcaaaacaatccttttccttgtgagatgagaggaata
tccaacagacacttgagtgattttgtcaaacctatttcaagcaaaggaatgtcgattgag
gaaattcatctgtctgaggatgaaatggaactttatctcgatcttgcaccgtttctaaat
ccttgcccatacattgtgccagaagacatgtctttagcgaaggtgtacaatcttttccgg
caattaggactgaggcatatattcgttgttcctcgtccttcacgtgttatgggtttaatc
actaggaaggatttgttagttgaggagagtgatagttctgccaccgtggaacttcaatca
actagtgtaagagatcaacatcaagatagaagagcaaatggtcgacacacacatctggaa
caccctctcctggatagtctcctcgtccaagaatag
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