Zingiber officinale (ginger): 122033390
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Entry
122033390 CDS
T08725
Name
(RefSeq) chaperone protein ClpC1, chloroplastic
KO
K03696
ATP-dependent Clp protease ATP-binding subunit ClpC
Organism
zof
Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
zof03110
]
122033390
Chaperones and folding catalysts [BR:
zof03110
]
Heat shock proteins
HSP100
122033390
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
Clp_N
AAA_lid_9
ClpB_D2-small
AAA
AAA_5
AAA_16
Sigma54_activat
AAA_22
UVR
nSTAND3
TniB
NBD_SMAX1
AAA_14
AAA_18
AAA_28
NACHT
Mg_chelatase
Zeta_toxin
IstB_IS21
AAA_25
ACT_9
Torsin
DNA_pol3_delta2
AAA_23
Motif
Other DBs
NCBI-GeneID:
122033390
NCBI-ProteinID:
XP_042448329
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Position
11B:complement(72974920..72982972)
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AA seq
921 aa
AA seq
DB search
MAGSLVQSAILPTVAVNKGQSHLRGSGKGKRGATMIRYQRTPLQLQGFIGLRRVDNLGTS
SRCNHDFCSVVSRYISYPQGKTSRGVAKAMFERFTEKAIKVIMLAQEEARRLGHNFVGTE
QILLGLIGEGTGIAAKVLKSMGINLKDARVEVEKIIGRGSGFVAVEIPFTPRAKRVLELS
LEEARQLGHNYIGSEHLLLGLLREGEGVAARVLESLGADPSNIRTQVIRMVGESTEAVGA
GVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQAQIERVTQILGRRTKNNPCLIGE
PGVGKTAIAEGLAQRIANGDVPETIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIK
QSDEIILFIDEVHTLIGAGAAEGAIDAANILKPALARGELQCIGATTLDEYRKHIEKDPA
LERRFQPVKVPEPTVDETILILRGLRERYEIHHKLRYTDEALVAAAQLSYQYISDRFLPD
KAIDLVDEAGSRVRLRHAQLPEEARELDKELRQITKEKNDAVRGQDFEKAGELRDREMEL
KAQISALIDKGKELSKAESEAGDGGPLVTEVDIQHIVSSWTGIPVEKVSTDESDRLLKME
ETLHKRVIGQDEAVQAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYF
GSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAH
PDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDS
SYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKQEVKEIADIMLKEVFDRLKAKDIE
LQVTERFKDRVVDEGYNPSYGARPLRRAIMRLLEDSLAEKMLAGEIKEGDSAIVDVDSEG
NVTVLNGGSGLPESVPPAIPV
NT seq
2766 nt
NT seq
+upstream
nt +downstream
nt
atggctggttctttggttcaatcagcaattcttcccactgttgcagtgaacaaaggacaa
agccatctgcgaggctctgggaaaggtaaaagaggtgccacgatgatacgttatcaaaga
acacctcttcaattgcagggcttcataggattaagacgagtagacaacctaggcacttct
tcaagatgtaatcatgacttttgttcagtggtttcgagatatatatcttatccccaggga
aaaaccagtcgaggagttgcgaaagctatgtttgagcgatttacagagaaggcaatcaaa
gtaattatgcttgctcaagaagaggcaaggcgtctaggtcataattttgttgggacagaa
caaatactattgggccttattggtgaaggaacaggtatcgctgcaaaagttttgaaatca
atggggattaatcttaaagatgctagagtggaagtggaaaaaatcatcggcaggggaagt
ggatttgtggctgttgagatacctttcacacctcgtgcaaagcgtgttttagaactctca
ttagaggaagctcggcagcttggacataactacatagggtcagaacatttacttcttggg
cttcttagggagggtgaaggtgtagctgcacgtgtgcttgagagtcttggagctgatcct
agcaacattcgtacccaggtcattcgaatggtaggagaaagcactgaagcggttggtgca
ggggtaggtggaggaagcagcggcaataagatgcctacacttgaggagtatggaactaat
ttaacaaagttggcagaggagggaaagctagatccagttgttggcaggcaagcacaaata
gaacgagttacacaaattttgggcaggcggacaaagaataatccctgtctaattggggag
cctggtgttggaaagacagctattgcagagggacttgctcagcgcatagcaaatggtgat
gttccagaaacaattgaagggaaaaaggtgattactcttgatatgggacttcttgttgct
ggtactaaataccgtggagagtttgaagaaaggttaaaaaaattgatggaagaaattaaa
caaagtgatgaaataatactattcattgatgaagtacatacattaattggagcaggagca
gcagagggtgccatagatgctgctaatatcttaaaaccagctcttgcaagaggtgaattg
cagtgcattggagccacaacacttgatgaatacaggaaacacattgagaaggatcctgct
ttggaaagacgttttcaaccagtaaaagttcctgaaccaacagtggatgaaacaatactg
attcttagagggctacgggaaagatatgagattcaccacaaacttcgttacactgatgag
gctttagttgctgctgctcaattgtcctatcagtacattagtgatcgatttttaccggat
aaagcaattgacttggttgatgaagcgggatctcgtgttaggcttcgccatgcacagctt
cctgaggaagccagggaactggacaaagagcttaggcagatcaccaaagaaaagaatgat
gcagtccgtggtcaggattttgaaaaggcaggggaactgcgtgatagggagatggagctg
aaggcgcagatctcagctctgatagacaagggcaaagaactaagcaaagcagagagtgag
gcaggtgatggtggtcctctggtaacagaagtagacatccaacacattgtatcttcatgg
actggaattcctgtagagaaagtctctactgatgagtctgatcgcctcctcaaaatggaa
gaaactctccataaacgtgttattgggcaggatgaagctgttcaagctataagtcgtgcc
attcgtagagctcgcgtgggtcttaagaatcccaatcgcccaattgctagcttcatattt
tctggtccaactggtgttggaaaatcagaattggcaaaggcactagctgcttattatttt
ggctctgaggaagccatgatccggcttgacatgagtgaatttatggagagacatactgtt
tcaaagctcattggctcgccgccaggttatgttggttacactgagggtggccagcttacc
gaagcagttcgtcgccgcccttacactgtcgtcctctttgatgagatagagaaagctcac
cctgacgtcttcaacatgatgctccagattttggaagatgggaggttgacagacagcaag
gggcgtacagtggactttaagaataccctcctaattatgacctccaatgttggtagcagt
gtgatcgaaaagggaggacggagaattggatttgaccttgactacgatgaaaaggacagc
agctacaaccgaattaaaagccttgtgacagaggagttgaaacaatactttcgtccagag
ttccttaatcggcttgatgaaatgattgtcttcagacagttgaccaaacaggaagtcaaa
gaaattgctgatataatgctcaaggaggtctttgacaggctgaaagccaaggatattgaa
ctacaggtgacagagagattcaaggatagggtggtggatgaaggttacaacccaagttat
ggagccaggccactgagaagagccataatgaggctcctggaggatagcttggctgagaaa
atgctagctggggagatcaaggagggagactcggcaatcgttgatgtcgattcagaagga
aatgtcactgttctaaatggtgggagcggcttgcctgaatcagttcccccagctattcct
gtatag
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