Zingiber officinale (ginger): 122033490
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Entry
122033490 CDS
T08725
Name
(RefSeq) amino acid transporter AVT1A-like
KO
K15015
solute carrier family 32 (vesicular inhibitory amino acid transporter)
Organism
zof
Zingiber officinale (ginger)
Pathway
zof04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
122033490
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
zof02000
]
122033490
Transporters [BR:
zof02000
]
Solute carrier family (SLC)
SLC32: Vesicular inhibitory amino acid transporter
122033490
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Aa_trans
Motif
Other DBs
NCBI-GeneID:
122033490
NCBI-ProteinID:
XP_042448462
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Position
11B:complement(38340799..38396907)
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AA seq
530 aa
AA seq
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MEKGSSVAVMEEKDLEFLFDGSTDGEEDVEAQTENGEEEEGDRSASIFSQQWPKSYRESI
DTYTISASPAFGNLGPMPSIKYSSLLSQFGQESDLRSLLLPSSICEKLESNKSVRKSLGL
VSNKSASFLVEYSGEVYIHHGCSVTQTVFNGINVLAGVGLLSTPFTVKEGGWASLVMLLC
FAVVCYYTGILMKFCFESKEDIFSYPDIGEAAFGKFGRLFVSVVLYAELYSYCVEFIILE
GDNLTKIFPGASLDWAGLHVDSIHLFGILTALIILPTVWLRDLRIISYLSAGGVISTIVI
FLSVVFIGSVDGIGFHHSGKAVKWGGLPFSIGVYGFCYSGHSVFPNIYQSMSDRTKFSRA
LLICFILCTLINGSFAAIGYLMFGEATLSQLTLNLPKDSFASTVALWTTVINPFTKYALL
LNPVARSLEELLPQETSDKVWCSMLLRTGLVVSTVLVAFVLPFFGLMMALVGSLLSILVA
IIMPSLCFLRISRNKATSSQVAISIAIVALGVVCASHGTYSSISQIANKY
NT seq
1593 nt
NT seq
+upstream
nt +downstream
nt
atggagaaggggagttcagtggcggtgatggaggagaaggacctggagtttctcttcgac
ggaagcaccgatggagaagaagacgtggaggcccagacggagaatggggaggaggaggag
ggagatcgttcggcttcgatcttttcccagcagtggcctaaaagctacagggaaagtatt
gatacatacacgatttctgcatcaccagcattcggaaatcttgggcctatgcctagtatt
aaatactctagcttgctcagtcaatttgggcaagaatctgatttgagatcacttcttctt
cccagtagtatatgtgagaagctagaatccaataaaagcgtaaggaaatctcttggtttg
gtatcgaataagtcagcctccttcctggttgagtattctggtgaagtatacattcatcat
ggatgtagtgtaactcaaacagtctttaatggaattaatgtattagctggggttggcctt
ctttctactccatttactgtgaaagagggaggatgggctagtttggtaatgttactttgt
tttgctgtagtttgttactacactggcattcttatgaagttttgctttgagagcaaagaa
gacatttttagctaccctgatattggtgaagctgcatttggaaaatttggacgcttattt
gtatctgttgtcttgtatgcggaactatattcatattgtgttgaatttattattttagaa
ggtgataaccttactaagatctttcctggggcttctttggattgggctgggctgcatgta
gattctatccatttgttcgggattttaactgctctaattattctaccaactgtttggcta
cgagaccttagaataatctcttatctatcagctggtggagttatttccactatagtgatc
tttctctctgtggtcttcattggttctgtcgatggcattggattccatcattctggtaaa
gctgtgaaatggggaggcctaccattttctattggtgtgtatggtttttgttactccggc
cattcagtgtttccaaatatttaccaatcaatgtcagatcgaactaaattcagcagagca
ttgttaatatgtttcattttgtgcacgttgataaatggctcgtttgccgccattggatat
ctcatgttcggtgaagctacgttgtcccaattaacattgaacttaccaaaggattcattt
gcctcaacagttgctttatggacaacggtgatcaatccattcaccaaatatgcattatta
ctaaatcccgtagccagatctctggaagagctgcttccccaagaaacttctgacaaagtt
tggtgctccatgttgttaagaacagggcttgttgtatctaccgtactggtagcttttgtt
cttccattttttggtcttatgatggcattagttggttcacttctcagcatcctagtggcc
atcataatgccatccctgtgtttcttgaggatatcgaggaacaaagctacatcctcgcag
gttgcaattagcatagcaattgttgcattgggcgttgtgtgcgcttcccatgggacatat
tcatccatttcgcaaatagcaaataaatactga
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