Zingiber officinale (ginger): 122033516
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Entry
122033516 CDS
T08725
Name
(RefSeq) 25.3 kDa vesicle transport protein-like isoform X1
KO
K08517
vesicle transport protein SEC22
Organism
zof
Zingiber officinale (ginger)
Pathway
zof04130
SNARE interactions in vesicular transport
zof04145
Phagosome
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
122033516
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
122033516
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
zof04131
]
122033516
Membrane trafficking [BR:
zof04131
]
SNARE
VAMP, Ykt6, Sec22 (R)
Sec22
122033516
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Longin
Synaptobrevin
Motif
Other DBs
NCBI-GeneID:
122033516
NCBI-ProteinID:
XP_042448489
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Position
11B:85264170..85270611
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AA seq
294 aa
AA seq
DB search
MPFRGSVSLAASSSSRCSASPSERSNSCRRWTPTRFAAVFSSSSPTSFFLAECAPSLFCL
PFSRVKMVKLTMIARVTDGLPLAEGLDDGRDQKDADFYKQQAKLLFKNLSKGHYEASRMS
IETGPYFFHYIIEGRVCYLTMCDRSYPKKLAFQYLEDLKNEFERVNGNQIETAARPYAFI
KFDTFIQKTKKLYLDTRTQRNIAKLNDELYEVHQIMTRNVQEVLGVGEKLDQVSQLSSRL
TSESRIYADKAKDLNRQALIRKWAPVVIVLGVVMFLFFIRKKTKEHQGGHRNIH
NT seq
885 nt
NT seq
+upstream
nt +downstream
nt
atgccctttcgcggaagcgtttctctcgctgcttcatcctcgagtcggtgttccgcgtca
ccaagcgagcgctcgaacagttgccggcgctggactccgactcggttcgccgcagtcttt
tcgtcatcctcgccaacgagcttcttccttgcagagtgcgctccgtcgctgttttgcctt
ccattctccagggttaagatggtgaagttgacaatgatagcacgtgttactgatggctta
ccattagctgaaggattggatgatggtcgtgaccagaaagatgcagacttttataagcag
caagctaagcttttatttaagaatctgtcgaagggtcattatgaggcttctagaatgtca
atcgagacaggtccatacttcttccactacattattgaggggcgtgtttgttaccttaca
atgtgtgatcggtcttacccaaagaagcttgcttttcaatacctggaagacctcaagaat
gagtttgagagagtcaacgggaatcagatcgaaactgccgcaagaccttatgcttttatc
aagtttgatactttcatacagaagaccaagaagctttatttggatactcgcacccagcga
aatattgctaagctgaatgatgaactctatgaagtccaccaaataatgactcgcaacgta
caggaggttcttggtgttggtgaaaagttagaccaggtgagtcaattatcaagcaggttg
acatctgagtctcgaatatatgctgataaggctaaagatctaaatcgacaggctttgatt
cgaaaatgggctcctgtcgtcattgttcttggagtagtaatgtttctcttttttattaga
aagaagaccaaggaacaccagggtggccaccgcaacattcattag
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