Zingiber officinale (ginger): 122033540
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Entry
122033540 CDS
T08725
Name
(RefSeq) dynamin-2A-like
KO
K01528
dynamin 1/3 [EC:
3.6.5.5
]
Organism
zof
Zingiber officinale (ginger)
Pathway
zof04144
Endocytosis
zof05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
122033540
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
122033540
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
zof04131
]
122033540
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
zof04147
]
122033540
Enzymes [BR:
zof01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.5 dynamin GTPase
122033540
Membrane trafficking [BR:
zof04131
]
Endocytosis
Clathrin-mediated endocytosis
Dynamin
122033540
Lipid raft mediated endocytosis
Caveolin-mediated endocytosis
122033540
RhoA-dependent endocytosis
122033540
Exosome [BR:
zof04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
122033540
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dynamin_N
Dynamin_M
GED
PH
PH_11
MMR_HSR1
PH_8
AIG1
GTP_EFTU
PH_20
RsgA_GTPase
Motif
Other DBs
NCBI-GeneID:
122033540
NCBI-ProteinID:
XP_042448517
LinkDB
All DBs
Position
11B:3488649..3503326
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AA seq
929 aa
AA seq
DB search
MEALEELSELADAMMQASALLADEDVDEGSTKRRTSTFLNVVALGNVGAGKSAVLNSLIG
HPVLPTGENGATRAPISIDLQRDSSLSSKSIVLQIDSKSQQVSASALRHSLQDRLSKGTG
VQGSGKGRADEIYLKLRTSTAPSLKLIDLPGLDQRLMDDSIVSDYGARNDAILLLIVPAA
LAPEISSYRALRLAKEFDSEGSRTIGIISKIDQAAGDQKCLAAVQALLLSQGPPSTADIP
WVALIGQSVSIASAQAGSVGSENSLETAWRAETESLKTILTGAPQSKLGRVALVDALSKQ
IRSRMKLRLPNLLSGLQGKSQIVQDELFRLGEQMVESAEGTRAIALELCREFEDKFLQHV
ATGEGSGWKVVATFEGNFPNRIKQLPLDRHFDINNVKRIVLEADGYQPYLISPEKGLRSL
IKGVLELAKEPSRLCVDEVHRVLLDIVSASANGTPGLGRYPPFKREVIAIASTALENFRN
EAKKMVVALVDMERAFVPPQHFIRLVQRRMERQRKEDELKNRSSKKANEAEQAILNRASS
PQQGAQGGSLKSMKDKSNQQDKETKEGSTSTLQVAGPSGEITAGFLLKKSAKTNGWSKRW
FVLNEKSGKLGYTKKQEEKHFHGVITLEECNLEEVPDEEDPPKSSKDSKKANGAEKSPTL
VFKITSKVAYKTVLKAHSAVILKAENLAEKVEWMNKIGNITGSSKVTSSKGAPESGVTPM
RQSHSDGSLDTMVRRPADPEEELRWMSQEVRGYVEAVLNSLAANVPKAVVLCQVEKAKED
MLNQLYSSVSAQSNAKITELLQEDQNVKRRRERIQKQSSLLSKLTRQLSIHDNRAAAASW
SDGSSAAESSPRTNGTGEDWRSAFDAAANGSIDSSHTDSSSRSRSSSSRRHGTPTQNGDA
SSGANSGSRRTPNRLPPAPPQNSSAGYKY
NT seq
2790 nt
NT seq
+upstream
nt +downstream
nt
atggaggcgttggaggaattgagcgagctcgcggacgcgatgatgcaggcctctgccctc
ctcgccgatgaggacgtcgatgaggggtcgaccaagaggcggacgtccacgttcctcaac
gtcgtcgctctcggcaatgttggggctggtaaatcagcagtgttgaacagcttaatcgga
cacccggtcctgccaactggagagaatggcgcgactcgcgcccctatcagtattgatctg
caaagggatagttcactgagtagtaaatcaattgtcttgcaaatagacagcaaatctcaa
caagtctctgcgagtgcccttaggcactctcttcaggacagactaagtaagggaactgga
gttcaaggttcaggaaagggccgtgcagatgagatatatctgaagctccgtactagtaca
gctccgtctttaaaattaattgatcttccaggtttagaccagaggttaatggatgattct
attgtcagtgattatggtgcacgcaatgatgcaatattgctacttatagtgccagctgct
ctggcacctgaaatctcttcttatcgagctcttagactggctaaggaatttgattcagaa
ggaagtagaaccattggtattatcagcaagatcgatcaagctgctggggaccagaaatgt
cttgcagcagttcaagctcttcttttgtctcaggggccaccctctactgctgatattcca
tgggttgctctgatcggtcaatctgtttctattgcttcagcacaagctggttctgttgga
tctgaaaattcacttgaaacagcatggagagctgagactgagagtcttaaaactatactt
actggtgctccacaaagtaagcttggaagagtagcattagttgatgcactttccaagcaa
attcgcagtagaatgaagctgagattgccaaatcttctttcaggattacaaggtaagtca
cagattgtgcaggatgagttgtttagacttggtgaacaaatggtggagagtgcggaaggc
accagagctattgccttggagctttgtcgagaatttgaagacaagtttttgcaacatgtt
gcgactggtgagggttcaggttggaaagttgttgcaacatttgaagggaactttcctaac
agaataaaacaacttccactggatcgacattttgatatcaacaatgtcaaaagaattgtg
ttggaggctgatggttatcagccatacttgatatctcctgaaaaaggtttgcgatctttg
ataaagggagtactggaattagcaaaagaaccatcacgcctttgtgttgatgaggtccac
cgcgttctgttggatatagtttctgcttcagcaaatggtacacctggactaggtcgatat
cctccttttaaaagagaggtgattgctattgcatcaactgcattagagaacttcagaaat
gaggccaaaaagatggtggttgcattagttgatatggagcgtgcatttgttcctccgcaa
catttcattcgtctagttcagcggagaatggagaggcagcgtaaggaggatgagctgaag
aatcgatcatcaaagaaagcaaatgaagcagagcaagccatcttgaatagagcatcaagc
cctcaacaaggagctcaaggtggtagcttgaaatcaatgaaagataaatctaatcaacaa
gacaaagaaaccaaagagggttccacatccaccttgcaggttgctggaccttctggagaa
ataacagcaggattcttactgaagaaaagtgccaaaacaaatggctggagcaagcgatgg
tttgtcctcaatgagaaaagtggaaagcttggatacacaaaaaagcaggaggagaagcat
tttcacggggttatcactttggaggaatgtaaccttgaggaggttccagatgaggaagat
cctcccaaaagttcgaaggactccaaaaaagcaaatggagcagaaaaaagcccaaccctt
gtctttaagataactagtaaagttgcatataaaactgttttaaaagctcatagtgctgtg
attttaaaggctgagaacttggctgagaaagttgagtggatgaataagataggaaatatc
actggctcttcaaaagttacttcctcaaagggtgcacctgaatctggagttacaccaatg
agacaaagtcattctgatggttcacttgacacaatggttagaaggccagctgatcctgaa
gaagaacttcgttggatgtcccaagaagttcgaggttatgtagaggctgtattgaacagt
cttgctgctaatgtaccaaaggcagttgtgctatgtcaagttgagaaagctaaggaagat
atgttgaatcagctatatagctcagtaagtgctcaaagcaacgcgaagattacagaacta
ctccaggaagaccaaaatgtgaagcgtagaagagaaaggattcaaaagcaatcatctctc
ctctcgaaacttacacgtcaactaagcatccatgacaacagagcagctgctgctagctgg
tctgatggtagctcggctgcagaaagtagcccaaggaccaatggtaccggtgaggattgg
agatcagcatttgatgctgcggccaatggatcgatagacagctcacacactgactcatca
tctaggtccagaagcagcagcagccggcggcatggcaccccaacccagaatggcgatgca
agttcaggagcaaactctggtagtcgtcgtaccccaaacaggttgccacctgcaccaccg
caaaatagttcagctggatacaaatactag
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