Zingiber officinale (ginger): 122033660
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Entry
122033660 CDS
T08725
Name
(RefSeq) RNA-binding protein 39-like isoform X1
KO
K13091
RNA-binding protein 23/39
Organism
zof
Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
zof03041
]
122033660
Spliceosome [BR:
zof03041
]
Common components
Common spliceosomal components
General mRNP proteins
122033660
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RBM39linker
RRM_7
RRM_8
7TM_GPCR_Str
Motif
Other DBs
NCBI-GeneID:
122033660
NCBI-ProteinID:
XP_042448685
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Position
11B:complement(63486589..63501661)
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AA seq
568 aa
AA seq
DB search
MDFDEYEYLEKAVEEPEARKDKDRSGSRRHKDRGEDGEGRASKRSRPEEQNGDKRDRVER
ERDNDRAKDRRKSGRDSEKERDKDRDYRSREREYKDRDKGRERDSGKERERGKEKDKKRE
RERDKEKERDRSASRSRRDAERDRSASRSRRDAERDRSASRSRRDAESEMETARSKERRE
PELEREIHERESRRVKDKKDAEPEVDPERDQRTVFAYQMPLKANERDAYEFFSQAGKVRD
VRLIMDRNSRRSKGVGYIEFYDVMSVPLAIALSGQLLLGQPVMVKPSEAEKNLVQSTATA
AGVAGAAERKIYVGNLHYNITEEQLRQIFEPFGTVELVQLPLDETGHCRGYGFIQFAQLD
HVKAAQSLNGKLDIAGRIIKVSAVTDHVTVQETGTSAVDFDDEDGGGLSLNARSRAMLMQ
KLDRTGTASSIAESLGVPILNGAVPIQQPLSVPALSINPSMISVQQIPATVETSECLLLT
NMFDPSTETEPDFELDIKEDVQEECSKYGRVKHIFVDKNSNGHVYLRFESVTAASICQRA
MQGRWFAGRSVSATYMRQQDYEAKVGRD
NT seq
1707 nt
NT seq
+upstream
nt +downstream
nt
atggatttcgatgagtacgagtacctggagaaggcagtggaggagcccgaagcgcgcaag
gataaggatcgctccggctcaaggcgtcacaaggaccgcggggaggacggagaaggaagg
gcttccaagagatccaggccagaagagcagaacggcgacaagcgcgaccgagtggagcga
gaacgggacaacgaccgggctaaggaccgccgtaaaagtggtcgggactctgagaaggag
cgggacaaagatagggattatcgcagccgagagagggaatacaaggacagagacaagggg
cgggagcgggacagtggaaaagaaagagagcgaggaaaggaaaaggacaagaaaagagaa
cgcgaaagggataaggagaaggagagggacaggagtgctagcagatccagaagggatgcg
gagagggacaggagtgctagcagatccagaagggatgcggagagggacaggagtgctagc
agatccagaagggatgcggagagtgaaatggagaccgccaggagcaaagaaaggagagag
ccagagctcgagagagagatccacgaaagagaaagcagaagagttaaagataagaaagat
gcagagcctgaagttgatccagaaagagatcagagaactgtttttgcttaccagatgcct
ctgaaagctaatgaaagagatgcttatgagtttttctcacaagcggggaaggtgagggat
gtccgcttgattatggatcggaactcaagaaggtcaaagggagttggatacattgagttt
tacgatgtaatgtcagtgccactggctattgcactctctggccaacttttattgggtcaa
cctgtaatggttaaaccttctgaagctgaaaagaatcttgttcaatcaactgctacagct
gctggtgttgcaggtgctgctgaaagaaagatttatgttggaaaccttcactataacatt
acagaagagcaacttcgccagatttttgaaccatttgggactgtggagcttgttcaatta
ccacttgatgaaacagggcattgtcgaggttatggattcattcaatttgctcaacttgac
cacgtaaaggctgctcaaagtttaaatgggaaattggacattgctggccggatcataaag
gtttcggcagttacagatcatgtcactgtgcaggaaactgggacaagtgctgttgatttt
gatgatgaagatggtggtggtttgtcactaaatgctcgttcaagagctatgctcatgcaa
aagctggatcgcactggaactgcttctagcattgcggaatcacttggagtacccattctt
aacggtgcagttcccatccaacagccactcagtgtgcctgctctatcaatcaacccttca
atgatttctgtgcagcaaattccagctacggtggagacaagcgagtgcttattgctaaca
aatatgtttgatccaagcactgagacggagcctgactttgaattggatattaaagaggat
gttcaagaagaatgttccaagtatggtcgtgtcaagcatatatttgttgacaagaacagc
aatggccacgtatatcttcgatttgaaagtgtgacagcggcttcaatatgtcagcgtgct
atgcaaggtcgatggtttgcagggaggtcagtctcagccacttatatgcgacaacaagat
tacgaagccaaagttggacgtgactga
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