Zingiber officinale (ginger): 122033721
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Entry
122033721 CDS
T08725
Name
(RefSeq) serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A beta isoform
KO
K03456
serine/threonine-protein phosphatase 2A regulatory subunit A
Organism
zof
Zingiber officinale (ginger)
Pathway
zof03015
mRNA surveillance pathway
zof04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
122033721
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
122033721
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
zof01009
]
122033721
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
zof03019
]
122033721
03036 Chromosome and associated proteins [BR:
zof03036
]
122033721
Protein phosphatases and associated proteins [BR:
zof01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
122033721
Messenger RNA biogenesis [BR:
zof03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
122033721
Chromosome and associated proteins [BR:
zof03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
122033721
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEAT
PPP2R1A-like_HEAT
HEAT_2
HEAT_EF3_N
HEAT_EZ
Htt_N-HEAT_1
Vac14_Fab1_bd
PDS5
CLASP_N
Cnd1
CEP104-like_TOG
Adaptin_N
TAF6_C
TPR_TNPO3_IPO13_3rd
DUF3102
Motif
Other DBs
NCBI-GeneID:
122033721
NCBI-ProteinID:
XP_042448809
LinkDB
All DBs
Position
11B:19095901..19118810
Genome browser
AA seq
587 aa
AA seq
DB search
MAMIDEPLYPIAILIDELKNEDIQLRLNSIRRLSTIARALGEERTRKELIPFLSENNDDD
DEVLLAMAEELGVFIPYVGGIEYAHVLLPPLETLCSVEETCVREKAVESLCRIGAQMKEN
DVVEWFIPLVKRLAAGEWFTARVSSCGLFHIAYPSATELLKAELRSIYGQLCQDDTPMVR
RSAASNLGKFAATVEPNNLKTDIMSTFDDLTQDDQDSVRLLAVEGCAALGKLLEPQDCVA
HILPVIVNFSQDKSWRVRYMVANQLYELCEAVGPEPTSSDLVPAYVRLLRDNEAEVRIAA
AGKVTKFCRILNSQLAVQHILPCVKELSSDSSQHVRSALASVIMGMAPVLGKDATIEQLL
PIFLSLLKDEFPDVRLNIISKLDQVNQVIGIDLLSQSLLPAIVELAEDRHWRVRLAIIEY
IPLLSSQLGVGFFNDKLGALCMQWLEDKVFSIREAAANNLKRLAEEFGPEWAMQHIVPQL
LEKISNQHYLHRMTILQAISLLAPVLGSDITCQRLLPVIITASKDRVPNIKFNVAKVLQS
LIPIFDHSVVEQTVRPCLVELSEDPDVDVRYFANQALHACDAVMMSS
NT seq
1764 nt
NT seq
+upstream
nt +downstream
nt
atggctatgattgatgagccactgtatccaattgccatcttgatagatgagttaaaaaat
gaagacatacagctgcgcttaaattccattcgcaggttatctaccattgcacgcgcactt
ggggaagaaagaactagaaaagaactgataccttttcttagtgaaaacaatgatgatgat
gatgaggtgcttcttgcaatggctgaagagttgggggtgttcattccatatgtgggtggt
atagaatatgctcatgttttgctccctcctttggaaacattatgctctgtggaggaaact
tgtgttagagaaaaagcagttgaatctctttgtcggattggggctcagatgaaggaaaat
gatgtggtggagtggttcattcccttagtaaagagacttgctgctggtgagtggttcact
gccagggtttcttcttgtggattgtttcacattgcgtatccaagtgcaactgagttacta
aaggcagaattgcggtccatatatgggcaattatgtcaagatgatacgcctatggttaga
aggtctgctgcatcaaatcttgggaaatttgctgctactgttgagccaaacaatctgaaa
acagatattatgtctacatttgatgacctaacccaagatgatcaagattcagtccgcttg
ttggccgttgagggttgtgctgcccttggaaagctattggaaccacaagattgtgttgca
cacattcttccagtgattgttaatttctctcaggataaatcatggcgtgtgcgatatatg
gttgctaatcagttatatgaactttgtgaagctgttgggccagagcctacaagctctgat
ttggtgcctgcttatgtccggcttcttcgagataatgaggctgaagtgcgtatagctgct
gctggaaaagtgactaaattttgccggatcttgaactctcaacttgctgtccagcatatt
cttccgtgtgtgaaggaattatcttctgattcttcccagcatgtacgctccgctttggct
tcagttattatgggaatggctccagtcttagggaaggatgctactatcgaacaacttctt
ccaatctttctttctcttcttaaagatgaattcccagatgttcgactcaatatcattagc
aaacttgatcaagtaaaccaggttattggaattgatctgctttcccagtctttgctgcca
gctattgttgagcttgcagaagatagacactggcgagttcggcttgccataatagagtat
attcctctgctgtccagtcagttgggagttggttttttcaatgataaacttggtgccctt
tgcatgcagtggcttgaggataaggtcttctctattcgagaagcagctgctaataactta
aagcgtcttgctgaggaatttggcccagaatgggcaatgcagcacatagtgccccagttg
ctggagaaaataagcaatcagcattatctgcatcgcatgaccattctgcaagcaatctct
cttctagctcctgtcttgggttctgatataacttgccaaagattattgcctgtgatcatt
accgcttcaaaggacagggttccaaacatcaaattcaatgtggcaaaggtcctgcagtcg
ctcatacctatatttgatcactccgtagtcgagcagacagttcggccatgccttgtggaa
cttagcgaggacccagatgtcgatgtaaggtattttgccaaccaagcacttcacgcttgt
gatgcggtcatgatgtcaagctag
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