Zingiber officinale (ginger): 122033742
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Entry
122033742 CDS
T08725
Name
(RefSeq) polygalacturonase ADPG2-like
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
zof
Zingiber officinale (ginger)
Pathway
zof00040
Pentose and glucuronate interconversions
zof01100
Metabolic pathways
Module
zof_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
122033742
Enzymes [BR:
zof01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
122033742
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Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
End_N_terminal
Motif
Other DBs
NCBI-GeneID:
122033742
NCBI-ProteinID:
XP_042448841
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Position
11B:7300415..7303097
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AA seq
400 aa
AA seq
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MAGQSVIVISLFVLLLLASSSAATEVLADPSIYNVLDFGAKGDGNTNDTLAFVKAWSAAC
HNSKTPSTLLIPAGKTFLLSHINFEGPCNNFIYVMVEGNLKRTNEIWPEASGWLLFIQIK
GIKISGSGELDGQGANWWSCNEKNQCTQDRPHNLHMLGCTDAQILGLRSINSPMMHISVG
NSERVNISDITIIAPENSPNTDGIHVQESRFVDIRNSIIGTGDDCVSLSEGDENIFVNNV
TCGPGHGISVGSLGKDGSRSTASNIYVSNCTLTQTTNGVRIKTWQGGSGFAKNISFVNII
MNDVLNPIIIDQYYCPDSFCDASSSGVEVIDVKYIGVTGTSSSEVAIALNCSQSVPCSGI
VMDTVNLSSANKGGKVQSYCISANGYTKNQVTPAVSCLTQ
NT seq
1203 nt
NT seq
+upstream
nt +downstream
nt
atggctggacaaagtgttatcgtcatcagtctctttgttctccttcttcttgcttcttcc
tctgctgctactgaggttttggctgatccgtcaatatacaacgtcttagactttggagcc
aaaggcgatggcaacaccaatgacactctagcgtttgtaaaagcatggagtgcagcttgt
cacaacagcaagacaccctccaccttgctcattccggcagggaagacatttttgttgtct
catatcaatttcgaaggaccttgcaataacttcatttacgtgatggttgaaggaaacctt
aaacgaacaaacgaaatatggccagaagcttccggctggctgcttttcattcaaatcaaa
ggcataaaaatctcaggctccggcgagctcgacggccaaggggcaaactggtggtcatgc
aatgagaaaaaccaatgtacacaagacaggccccataatctacatatgttgggttgcacc
gatgcacagattttgggactgaggtcgatcaacagcccgatgatgcacatatctgtgggg
aatagtgagcgagtcaatatcagcgacatcaccatcatcgcccccgaaaacagtcccaac
accgacggcatccacgtccaggaaagccgatttgtcgacatcagaaactccataattgga
acgggagatgactgtgtgtcactgagcgaaggtgatgagaatatttttgtcaataatgta
acatgtggccctggccatgggataagcgttgggagcttgggcaaagatgggtcccggtca
acagcatccaacatctatgtctccaactgcacgttgacccaaacaaccaatggagtcagg
atcaagacatggcagggaggttctggttttgcgaagaacatatcgtttgtgaatatcatc
atgaatgacgtgcttaaccccattattatagatcagtactactgtcctgacagcttctgc
gatgccagttcatcaggagtagaagtgatcgatgtgaaatacattggagtgacaggaacc
tcatcgagcgaagtagcaatcgctctgaattgcagccaaagtgtgccttgcagtggcatt
gtcatggacactgtcaatctgtcgtctgcaaataaaggaggaaaggtgcagtcttactgc
atcagtgccaatggatatacgaagaatcaagtcacgcctgctgtttcttgcttgacccag
tga
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