Zingiber officinale (ginger): 122033749
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Entry
122033749 CDS
T08725
Name
(RefSeq) polygalacturonase ADPG2-like
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
zof
Zingiber officinale (ginger)
Pathway
zof00040
Pentose and glucuronate interconversions
zof01100
Metabolic pathways
Module
zof_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
122033749
Enzymes [BR:
zof01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
122033749
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Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Motif
Other DBs
NCBI-GeneID:
122033749
NCBI-ProteinID:
XP_042448848
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Position
11B:7746834..7749414
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AA seq
395 aa
AA seq
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MARRGLISLFVIFLLAAEILAHEKTYNVVDFGAKGDGYTDDTQAFVNAWSWICHNSTRPS
ALLIPAEKTFLLDRIVFRGPCNYAIHLKVDGNLKRINEIWKDKFNSWLLFIRISVLNIYG
SGELDGQGTDWWSCKMKNQCPFEAAHNLELLSCTYVQIWGLKLINSPMMHIAVGQSKNVY
IGGITISSPSDSPNTDGVHIQKSQHVMVTDSVIGTGDDCVSMSDGAVDVSVSNVTCGPGH
GISIGSLGIAGTVATASDIYVSNCTFSQTTNGVRIKTWQGGSGFARNISFVNIKMNEVHY
PIIIDQYYCPHKSCSYKTAAVQVSDVKYLDVAGSSTSKLAITLNCSQTVPCTGITMDNVN
LWSANQGQQVQSNCINAKGSAGNKISPAVPCLTTY
NT seq
1188 nt
NT seq
+upstream
nt +downstream
nt
atggctagacgaggtcttatcagtctctttgtgatctttcttcttgctgctgagattttg
gctcatgagaaaacatacaacgtcgtagactttggagccaaaggagatggctacacagat
gacactcaagcgtttgtaaatgcatggagttggatttgtcacaacagcacaagaccctcc
gccttgctcattccggcagagaagacatttttgttggatcgcattgttttccgaggaccc
tgcaactatgccattcacttaaaggttgatgggaatcttaaaagaataaatgaaatatgg
aaagacaagttcaatagctggcttcttttcattcgaatcagcgtcctaaacatctatggc
tccggcgagctcgacggccaagggacagactggtggtcatgcaaaatgaaaaatcaatgt
ccatttgaagctgcccataacctggagctgctgagttgcacctatgtacagatatggggg
ttgaagctgatcaacagccccatgatgcatatagcagtgggacaaagcaagaatgtctac
atcggagggatcaccatctcctcccccagcgacagccccaacaccgacggcgtccacatc
cagaaaagccaacatgtcatggtaacagactccgtaattggcacaggagatgattgtgtg
tcgatgagtgatggtgctgtggatgtttctgtcagcaatgtaacatgtggtcctggccat
ggaataagtattgggagcttgggcatagctgggaccgtggcaacagcatcagacatctac
gtttccaactgcaccttctcccaaacgaccaatggagtcaggatcaaaacatggcaggga
gggtctggctttgcgaggaacatatcatttgtgaatattaagatgaatgaagtgcattac
cccataattatagatcagtactactgtcctcacaaaagctgctcatataagacagcagca
gtccaagtgagcgatgtgaaatatctcgatgtggcaggaagctcaacgagtaaattagca
attactctgaattgcagtcaaactgtgccttgcaccggcatcaccatggacaatgttaat
ctgtggtctgcaaatcaaggacagcaggtgcagtctaactgcatcaacgccaaaggatct
gcaggaaataaaatttcgcctgcagtcccttgcttgactacttactga
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