Zingiber officinale (ginger): 122034071
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Entry
122034071 CDS
T08725
Name
(RefSeq) myosin-6-like
KO
K10357
myosin V
Organism
zof
Zingiber officinale (ginger)
Pathway
zof04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
122034071
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
zof03019
]
122034071
04131 Membrane trafficking [BR:
zof04131
]
122034071
03029 Mitochondrial biogenesis [BR:
zof03029
]
122034071
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
zof04812
]
122034071
Messenger RNA biogenesis [BR:
zof03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
122034071
mRNA cycle factors
P-body specific factors
122034071
Membrane trafficking [BR:
zof04131
]
Others
Actin-binding proteins
Myosins
122034071
Mitochondrial biogenesis [BR:
zof03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
122034071
Cytoskeleton proteins [BR:
zof04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
122034071
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myosin_head
DIL
IQ
Myosin_N
AAA_16
Hpr_kinase_C
Flp1_like
AAA_22
Motif
Other DBs
NCBI-GeneID:
122034071
NCBI-ProteinID:
XP_042449136
LinkDB
All DBs
Position
11B:complement(78473791..78497923)
Genome browser
AA seq
1506 aa
AA seq
DB search
MASKFSIVVGSQVWVEDPDEAWIDGEVLEAKGDEIKICCTSGKMVTANISSVHPKDPEAS
PCGVDDMTKLAYLHEPGVLQNLRSRYDMNEIYTYTGNILIAVNPFRRLNHLYDSHMMEQY
KGAAFGELSPHPFAVADVAFRLMRNEGVSQSILVSGESGAGKTESTKMIMRYLAYMGGRA
ASEGRTVEQQVLQSNPVLEAFGNAKTVRNNNSSRFGKFVEIQFDERGRISGAAIRTYLLE
RSRVCQISDPERNYHCFYMLCAAPPEDIQRYKLENPRAFHYLNQSNCFELDGVNDSKEYL
ETKKAMDIIGINSDEQDAIFRVVAAILHLGNIEFVDGGETDSSQPKDEKSLFHLRTAAEL
FMCDATALEDSLCKRIIVTRDENIIKTLDPEAAALSRDALAKIVYSRLFDWLVNKINNSI
GQDPNSKSLIGVLDIYGFESFKTNSFEQFCINLTNEKLQQHFNQHVFKMEQEEYTKEEIS
WSYIEFVDNQDILDLIEKKPGGIIALLDEACMLPRSTHETFAQKLYQAFKNHNRFSKPKL
SRSDFTICHYAGEVTYQTELFLDKNKDYVVAEHQALLSASKCSFASSLFPPLSDDASKSS
KFSSIGSRFKQQLQSLLETLSSTEPHYIRCVKPNNLLKPGIFENQNVLQQLRCGGVMEAI
RISCAGYPTRRAFCEFIDRFGILSPEVLDGSCDELTAAKRLLEKTGLKAYQIGKSKVFLR
AGQMAELDARRNEVLGRSAGTIQRKVRSYLARKNFIVLKNSVIQIQAICRGELARQIYEN
MRRQAAALNIQTFFRMHLARIAYKMLLSSVVTIQTGLRGMVAREELHFRRQTKAAIIIQS
HCRKYLACLDYSRMKKAVITSQCAWRGKVARRELRKLKMAARETGALQAAKNKLEKQVEE
LTWRLQLEKRMRADLEEAKTQENAKLQAALQDMQQQCKETKSMLIKEREAAKKAAEVAPI
IKEVPVVDTVQMDKLRDENKKLKALLSSLETKIDETEKKFEETSRISEERLKKAMDAETK
IIQLNNSVQRFKEKLSNMESENQILRQQTLLHSPVKRMSEHLSIPSTPTNHSLENGNHHV
ADPKSAPPAIKDCANADAKPNKFHAERQLVSVICSLNLKLLPHSKVAALTMYKCLLHWKS
FEAERTSVFDRLIQMIGSAIENEESNDHLAYWLSNASSLLFLLQKSIKPPGAAGANPHRK
PPAPTSLFGRMTQSFRSSASFTNIAVDGLDVVRQVEAKYPALLFKQQLTAFVEKMYGMIR
DNVKKDLSSLLSLCIQAPRTTRVIMLRGSGRSFGNQGQSNHWKTIVESLDDLLKMLQENC
VPSILIQKMNTQIFSYINVQLFNSLLLRRECCSFNSGEYVKSGLAELELWCAKAKSEYAG
SSWDELKHIRQAVGFLVIFQKSRISYDEIVHDLCPVLSAHQLYRICKQYWDDKYDTKSVS
SEVLSNMRVLMTEDSNSAESSSYLLEDNSSIPFSIDDLSTSLHAKDFSEVRLAEELLQNP
AFHFLE
NT seq
4521 nt
NT seq
+upstream
nt +downstream
nt
atggcaagtaagttcagcatagtagtaggatcacaagtctgggtcgaggatcctgatgag
gcttggatagatggagaagttttggaggccaagggagatgagattaagatctgttgtact
tctggaaaaatggtgacagccaatatttctagtgttcaccctaaggatcctgaagcttca
ccttgtggagtagacgacatgacaaaacttgcctatttgcacgaacccggagttttgcaa
aacttgagatctagatatgacatgaatgaaatttatacttatactggcaatatattgatc
gctgtcaatcccttccggcgtttgaatcacctgtacgacagccacatgatggaacaatat
aaaggagcagctttcggtgaattaagtccccatccttttgctgttgcagatgttgctttt
cgattgatgagaaatgaaggagtaagccaatcaattttagtaagcggggaaagtggtgct
ggtaaaactgaaagcacaaagatgattatgcgttaccttgcttacatgggcggtcgagct
gcatcagaagggaggactgtcgagcaacaagtgctccagtcaaatcctgttcttgaagcc
tttggaaatgcaaaaacagtaagaaacaacaactcaagtcgttttggcaaatttgttgag
attcagtttgatgagaggggaaggatttctggggctgccattaggacttaccttcttgaa
agatcccgagtttgccaaatatctgatcctgaaaggaactatcattgcttttacatgctt
tgtgcagcaccaccagaagacattcaaagatacaagctggaaaatccaagggcgtttcat
tatcttaaccaatctaactgctttgagcttgatggggtgaatgattccaaggagtatcta
gaaacaaaaaaggctatggatatcattgggatcaattctgacgaacaggatgctattttc
cgtgtggttgctgctattcttcatctaggaaatattgagtttgtagatggaggggaaaca
gattcttctcaacctaaagatgagaagtcactgttccatttgagaactgctgcagagcta
tttatgtgtgatgcaacggcacttgaagattctttgtgtaagcgtattattgttactcgg
gatgagaatataataaaaaccctggacccagaagctgcagctttaagtagagatgccctt
gcaaaaattgtttactcaagactgtttgattggcttgtaaacaagatcaacaactcaatt
ggtcaagaccctaattcaaagtccttaattggggtgctggacatatatggctttgagagt
tttaaaactaacagttttgagcagttctgtatcaatcttacaaatgaaaaattgcagcag
cacttcaatcagcatgtctttaagatggagcaagaagaatataccaaagaagaaattagc
tggagttatattgagtttgttgataaccaggacatactcgaccttattgaaaagaaacct
ggtggaatcattgctctcctagatgaggcttgcatgttgcctagatcaacacatgaaact
tttgctcagaaactataccaggcttttaaaaatcacaaccgctttagcaagcccaaatta
tctcggtctgactttaccatttgtcactatgctggtgaagttacatatcagacggagttg
tttttagacaagaacaaggactatgtggttgctgagcatcaggctcttttaagtgcctct
aaatgttcttttgcttcaagtttatttccacctctttctgatgatgcatcaaaatcttca
aaattttcatcaataggctcgagatttaagcaacaactgcaatctctcctagaaactcta
agttccactgagccacattacattcgctgcgttaaacccaacaatctcttgaaaccggga
atatttgagaatcaaaatgttcttcagcagctccgctgtgggggagtgatggaggctatt
agaataagttgtgctggatatccgactagacgggcattttgtgaatttattgaccgtttt
ggcattctttcaccagaggttttggatggaagttgtgatgagttgactgccgcaaagagg
ttgctagagaagacaggtctcaaagcttaccagattggaaaatcgaaggtgtttcttcga
gctggtcaaatggctgaactggatgctcgtaggaatgaagtactgggaagatctgctggc
acaatccaaagaaaagtccggtcatacctggcccgtaaaaatttcattgtgcttaagaat
tcagtcatacagattcaggccatatgcagaggtgaacttgcaagacagatttatgaaaac
atgcgtagacaagctgctgcacttaatattcagacatttttccgtatgcatcttgcaagg
attgcttacaaaatgttactgtcttcggttgttaccatacaaactggcttaaggggaatg
gttgctcgtgaggaacttcatttcaggcggcagacaaaagctgctattatcattcagtcc
cattgccgtaaatacttggcttgcttggattactcaaggatgaagaaagctgttatcact
agtcaatgtgcttggagagggaaggttgcaagaagagagttgcggaagcttaaaatggca
gctagagaaactggtgcccttcaagctgccaagaataaattggaaaagcaagttgaagaa
cttacatggcgcctgcaattggaaaagcgcatgagagccgatcttgaggaagctaagacc
caggagaatgcaaaattgcaagctgctttgcaagatatgcaacaacaatgcaaggagact
aagtctatgttgattaaggaacgtgaggctgccaaaaaagctgctgaagtagctcctatt
attaaagaggttcctgttgtcgacacagttcaaatggataagcttagagatgagaataag
aagcttaaggctttgctgagctctctggagacaaagattgatgaaactgagaagaagttt
gaagagacaagtagaatcagtgaggaaaggctaaagaaggccatggatgctgaaactaag
ataattcaactgaacaattcggtgcagaggtttaaagagaaactttctaacatggaatct
gagaaccaaattctgcgacagcagacattattgcattctcctgtgaaacgcatgtctgag
catttatcaattccatcaactcctaccaatcatagtttggagaatgggaatcatcatgtt
gcagatcctaagagtgccccaccagctatcaaggactgtgcaaatgctgatgctaagccg
aacaaatttcatgctgagagacagcttgtgagtgtcatatgttccttaaatctaaagctt
ttacctcactcgaaagtagctgcattaactatgtataaatgtcttcttcactggaaatcc
tttgaagctgaaaggacaagtgtttttgatcgtctcatccagatgattgggtctgcgatt
gagaatgaagagtctaatgatcatcttgcttattggctatcaaatgcttcgagtttattg
ttcttgttgcaaaaaagcattaagcctcccggtgcagctggagctaatccacatcgaaaa
cctcctgctcccacatcattatttgggagaatgactcaatcatttcgttcttcggcatct
tttaccaacattgctgtggatggcctggatgttgtgcgccaagttgaagcaaaataccct
gccttgcttttcaagcaacagctaacagcttttgtggagaagatgtatggaatgattcga
gacaacgtgaaaaaggacttatcttctttgctttcattgtgtatacaggctccaagaaca
acaagggtaattatgctgcgtggctctgggcgttcatttggaaaccaaggacaaagtaat
cactggaagaccattgttgagagtttggatgaccttcttaagatgttgcaagagaactgt
gtgccttctattctcattcagaagatgaatacacaaattttctcatacataaatgtacaa
ttatttaacagtttacttcttcggcgtgaatgttgttccttcaacagcggagagtatgtt
aaatctggtttagctgagttggaattgtggtgtgcaaaagcaaaatctgagtatgctgga
tcatcctgggatgagcttaagcacataagacaggctgttggtttcttggtcatattccag
aagtctaggatttcctacgatgagatagttcacgatctgtgtccggtacttagtgcgcat
caactttatagaatctgtaaacagtactgggatgacaagtacgacacaaagagtgtctct
tcagaggttctttcaaacatgcgggtactcatgacagaagattctaacagtgcagaaagc
agttcgtacttgttagaagacaactctagcattcccttctcaatcgatgacttgtctact
tctttacatgcaaaagatttctcggaggtcagactagctgaggagctcctccaaaaccca
gccttccattttttagagtga
DBGET
integrated database retrieval system
