Zingiber officinale (ginger): 122034073
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Entry
122034073 CDS
T08725
Name
(RefSeq) DNA (cytosine-5)-methyltransferase CMT2-like
KO
K00558
DNA (cytosine-5)-methyltransferase 1 [EC:
2.1.1.37
]
Organism
zof
Zingiber officinale (ginger)
Pathway
zof00270
Cysteine and methionine metabolism
zof01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
122034073
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
zof03000
]
122034073
03032 DNA replication proteins [BR:
zof03032
]
122034073
03036 Chromosome and associated proteins [BR:
zof03036
]
122034073
09183 Protein families: signaling and cellular processes
02048 Prokaryotic defense system [BR:
zof02048
]
122034073
Enzymes [BR:
zof01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.37 DNA (cytosine-5-)-methyltransferase
122034073
Transcription factors [BR:
zof03000
]
Eukaryotic type
Zinc finger
CXXC CpG-binding proteins
122034073
DNA replication proteins [BR:
zof03032
]
Eukaryotic type
DNA Replication Termination Factors
DNA methylation enzymes
122034073
Chromosome and associated proteins [BR:
zof03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
122034073
Prokaryotic defense system [BR:
zof02048
]
Restriction and modification system (R-M system)
Type II R-M system
DNA methyltransferases
122034073
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_methylase
BAH
Chromo
Motif
Other DBs
NCBI-GeneID:
122034073
NCBI-ProteinID:
XP_042449138
LinkDB
All DBs
Position
11B:78685740..78704597
Genome browser
AA seq
977 aa
AA seq
DB search
MDRLHRRKPSANLSFYTEYSVQRLNLQEHCHGVIGIYSRGSIEISMGRTGLQDFSKGYGN
RHPSQLSSVLQQTSSMGELSISHNFDASSANQEAVELAGSSMKRHKLSEPSVESLDSLRR
KPSKISGLASHGQGPDPVSNCDRENGFAVHRKRENGKGDLRHSPRLSSVDNSSSDTTVNN
SVRTVKHRHKRSIQKGRLRSPKKFESSEDTDKCFFVGEPIPEEEARERWPYRFVYQVSVV
VSLFAYDRVFLDVVHKNTQLGNLFDIGDCAYIKGPMDKPNYIGRILEFFETKNGDHYFRV
QWFFRAEDTVLKDHAAGHDKKRLFYSDLQNDNLLDCIVSKVQITETHAEPLESKSIPSCY
YYYNMKYSVDYSSFCNIWNTSGNMSSTMKESFAGNINSESLEKEDLAVLDLYSGCGGMST
GLCLGAAMAGVKLVTRWALDYSEPACISFKLNHPETQVRNETADDFFNLLKEWEKLCKRY
KVNVSTISDSCSKTSKVKDPPRKSGSQSNISKGEYEVSKIVDICYGDPADEGKPGLKFKV
RWKGYGPSEDTWEPLQNLRNCEELLNEFVLEGFKSNILPLPGSVDVVCGGPPCQGISGYN
RYRNFNAPLDDERNRQIVVFMDIVQFLKPKYVLMENVVDILNFADATLGRYALSRLVSMS
YQARLGIMAAGCYGVPQFRLRAFLWGSHPKEKLPPFPLPTHEVIVKNGCPQEFERNLVGY
DEGQPRVLEKPLLLEDAIADLPLVTHKEEWDEMPYGKSAQTEFQKFIRTPKHEILASAQK
RPKVSHSTLYDHRTTPLGDDDYLRICQIPRRKGANFRDLSGVTVGPDNTVQFDPKIERIL
LPSGRPLVPDYAMNFCHGKSSRPFARLWWDEIVPTVITIPNFRCQAMLHPEQERALTIRE
CARLQGFPDYYRFHGTVEERYRHVGNAVAVPVGRALGYALAMTWLRKNGDGPLMTLPPKF
AFSHTLQDLSTSTNNLH
NT seq
2934 nt
NT seq
+upstream
nt +downstream
nt
atggaccgactacaccggaggaaaccgtccgccaatttatctttctacaccgagtactca
gttcaacgtttaaatcttcaagagcactgccatggcgttatcgggatttactcacgtggt
tccatagaaatttctatgggccgaacaggcctccaggatttctcgaaaggatatggaaat
cggcatccctcccagctttcttccgttctccaacaaacctcaagcatgggtgaactttcc
atttcccacaactttgatgcttcttctgctaaccaagaggctgtcgagcttgctggttca
tcgatgaagaggcacaaattgtcagagccatcagtagagtctttggatagcctgcggcgg
aagccatctaagatatcaggattggctagccatgggcaaggtcctgatccagtgagcaat
tgtgatcgagaaaatggttttgcagttcataggaaacgagaaaatggtaaaggtgactta
cgccattcaccaaggctatcctctgtagataattctagttcagatactacagtgaacaat
agtgttcgcactgtcaaacataggcataagaggtcaattcagaaaggcagattaaggtca
ccaaagaagtttgagagtagcgaggacactgataagtgcttctttgttggggagcccata
cccgaggaggaagcaagggaaaggtggccctatcgctttgtgtaccaggtatctgtagtg
gtgtccctctttgcgtatgacagggtcttcctggatgttgtccataagaatacgcaattg
ggcaatttatttgatattggagattgtgcatatattaagggtcctatggacaagcccaat
tatattggcaggattttggaattttttgaaacaaaaaatggagatcactacttcagagtg
caatggtttttcagagcagaagatactgttttgaaagatcatgctgcaggccatgataaa
aagaggcttttttactctgatctacaaaatgataacttactagattgcattgtctctaaa
gttcagattacagaaactcatgctgaacccttggaatctaaatcaattccttcatgttat
tattattataacatgaaatattcagtggattattcttcattctgtaatatttggaacaca
tctggcaatatgagtagcactatgaaagaatcttttgcaggaaatatcaatagtgaatca
ttggaaaaggaagaccttgctgtactagacctatattctggttgtggtggaatgtcaact
gggctttgccttggagcagcgatggcaggggtcaaacttgtgacaagatgggcacttgat
tacagtgagcctgcttgcatcagttttaagttaaatcatccagaaactcaggttaggaat
gagactgctgatgatttctttaacttactgaaagaatgggaaaaactatgcaaaaggtat
aaagtaaatgtttctacaataagtgattcttgctcaaaaacatccaaagtgaaagatcct
ccaaggaagtctggctctcagtccaacatttcaaaaggtgaatatgaagtatcaaagata
gttgacatttgttatggagatcctgctgatgaaggaaaacctggattaaagttcaaggtt
cgctggaaaggttatggccctagtgaagatacctgggaaccattgcagaatttaagaaat
tgtgaagaactactaaatgaatttgttttagaaggattcaaatcaaacatattaccactt
cctgggagtgtagatgtggtgtgtggaggacctccatgtcaaggaattagcggttataat
aggtacagaaatttcaatgcaccacttgatgatgaaagaaaccgacaaatcgtggtcttc
atggacatagtacaatttttgaagcctaaatatgttttaatggaaaatgttgtggatata
ctgaactttgctgatgctactcttgggcgatatgctttgagtcgtttagtttctatgagc
taccaagctagacttgggatcatggctgctggttgttatggtgtccctcagtttcgtttg
cgggcctttctgtggggaagtcaccccaaagagaaactaccaccatttccattaccaaca
cacgaggtgattgtgaagaatggttgtccgcaagaatttgagcgcaatcttgttgggtat
gatgaagggcagccacgggtgcttgaaaagccccttcttctcgaagatgctattgctgat
cttccactagttacacataaagaagaatgggatgaaatgccatatgggaagagtgctcaa
actgagtttcaaaagttcattcggacaccaaaacatgaaatattggcatctgcacaaaaa
cgtccgaaggtatcacactctactttgtatgaccatcgcacgacgccgttgggagatgat
gattatttgcgaatatgccaaattccacggagaaagggagcaaattttagagatctttca
ggtgtcactgttggtcctgataatactgtccagttcgaccccaaaattgagagaatactg
ctaccttctgggaggccactggttccagattatgccatgaatttttgccacggaaaatca
tcaagaccttttgctcggctttggtgggatgaaatagtaccaactgtgatcactatacca
aattttcgttgccaggcaatgctacatcctgagcaagagcgagcacttaccattcgagaa
tgtgcaagattgcaaggttttcctgattactacagattccatgggacagtggaagaaaga
tatcgccatgttggcaatgctgtagctgttccagtaggtcgggctctcggatatgctttg
gctatgacatggcttagaaaaaatggagatggacccctgatgacgctgccacctaagttt
gcattctcacacacacttcaagatctttctacatctactaacaacctgcattga
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