Zingiber officinale (ginger): 122034200
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Entry
122034200 CDS
T08725
Name
(RefSeq) E3 ubiquitin-protein ligase RGLG2-like
KO
K16280
E3 ubiquitin-protein ligase RGLG [EC:
2.3.2.27
]
Organism
zof
Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
zof04121
]
122034200
Enzymes [BR:
zof01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
122034200
Ubiquitin system [BR:
zof04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
122034200
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Copine
zf-C3HC4_3
vWA-TerF-like
TerY_C
zf-C3HC4
zf-C3HC4_2
Sina_RING
UBZ_FAAP20
zf-RING_2
Motif
Other DBs
NCBI-GeneID:
122034200
NCBI-ProteinID:
XP_042449272
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Position
11B:16220872..16234249
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AA seq
416 aa
AA seq
DB search
MGTGESKQRSSYRYPNDPGYTSGYSPRYSTTTSYAQPESTNRVQKRYSRINDDYQTLSQV
TDALAEAGLESSNLIVGIDFTKSNEWTGKVSFNRRCLHDIGSGPNPYQQAISIIGRTLSS
FDEDNLIPCFGFGDASTHDQEIFSFYPDNRPCEGFEEALERYKELVPNLRLAGPTSFAPI
IETAIGIVDNSGGQYHVLLIIADGQVTRSVDTQYGQLSPQERDTINAIVKASDFPLSIIL
VGVGDGPWDMMREFDDNIPSRAFDNFQFVNFTEIISRNIPTSRKEAEFALAALMEIPSQY
KATIDLQLLGRRRGIPDRVSLPPPTRNRYSRSSSFEQGPAFPRTASSFEQGPGITRSAQA
ISSERLIEEKLTCPVCLWKQKDLAFGCGHQTCYDCGKELQRCPMCQAHITTRIKLY
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
atgggaacgggagaatctaaacaacgcagttcttatcgctacccaaatgatcctgggtac
acttcaggttattcgccaaggtactccactactacaagctatgcacagcctgaatcaaca
aacagggtgcaaaaaaggtattcaagaatcaatgacgattatcagacactcagtcaggtt
accgatgcgcttgcagaagcaggtcttgaatcttctaatctgattgtgggcattgatttt
acaaagagcaatgagtggacagggaaagtttctttcaaccgccggtgtctgcatgacatt
ggaagtggtccaaacccctaccagcaagcaatatctattattggaaggacactctcttct
tttgatgaagataatcttattccatgctttggatttggtgatgcttctacccatgatcag
gaaatattcagcttttatccagataaccgaccatgtgaaggatttgaagaagcactggaa
cgatacaaggagctagtgccaaatctccgcctagctggaccaacatcttttgcaccaatt
attgaaactgccataggcattgtagacaactctggtgggcagtaccatgttctactcata
atcgctgatggacaggtaacaagaagtgttgacacacaatatgggcaattaagtccacaa
gagagagataccataaatgcaatagttaaagctagtgattttccattgtcaataattttg
gttggagttggtgatggtccgtgggatatgatgcgtgaatttgatgacaatataccttcc
cgggcatttgataatttccagtttgtgaattttacggagataatatctagaaacattcct
acgagtcgaaaggaggcagaatttgcacttgcagcactgatggagatcccttcacaatat
aaggcaacaatagaccttcaacttttgggtcgacgaagagggatacctgacagggtttct
ctacctccaccaaccaggaaccgttattcaagatcaagcagcttcgagcaaggacctgca
ttccccagaactgccagcagcttcgagcaaggacctggaatcactagaagtgcacaagct
atttcatctgaaagacttatagaggagaaactgacttgtccagtttgtctttggaaacaa
aaggatcttgcttttggatgtgggcatcagacttgctacgactgtgggaaagagttgcag
cgttgccccatgtgccaagctcatattacaactaggataaagctctactga
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