Zingiber officinale (ginger): 122034233
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Entry
122034233 CDS
T08725
Name
(RefSeq) uncharacterized protein LOC122034233
KO
K19022
AP-5 complex subunit beta-1
Organism
zof
Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
zof03400
]
122034233
DNA repair and recombination proteins [BR:
zof03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AP-5 complex
122034233
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP5B1_middle
AP5B1_C
DUF7661
Motif
Other DBs
NCBI-GeneID:
122034233
NCBI-ProteinID:
XP_042449324
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All DBs
Position
11B:complement(13003942..13012450)
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AA seq
1119 aa
AA seq
DB search
MEKQQSVKQLPSPNLSPQEWESLFDDFGSGSASRRSRWLHIPLVDLALYSLLRRDFPSHL
KPLLLFFIDDFLSSPSDAPPPSQALPPLIDALRSLLSSVDPSAAALRDQFMVTTVSAAIS
TLDAPLDLDSSALLEPLVEILLTVANRPNHGHDRQSRATACECLRELETAFPCLLKDVAG
HLWVLAQAERTHVAQSYLLLLAAVVRDLVLSPGLLSSPISILSTAVPLVPFNVPGFLFSD
PAADRDCEPSEVNLREIKRVLAFLWERPQALTPSATMELVSILTSIASTLEQYVPTLGAL
LKVQFSGLIYSYHPILCHVVLMLYSGFPDAFSGEDERNIALRLALMAREAYQPLPFRLLA
LHWLLGSPRLGQRKDSIAPLAPRLYPAVFDALSLKAKKLDALARIAANLDDLEMRKKGEE
EGRGALIIKFFQDGLVCVSAFQWLPPWSTETSVTFRMLHKFLIGVAPHRGDCSEECGYDY
LVDSTIFSTLQSKLVSLAMEHRGLVPVVVAFVDRLVGCKAHQSIGECLLHKLDEHLLPKL
VVDYQLTSYFPIFEKIAENNTIPPRGLLEVLTRHIATLMEKHGPDSALSLWSRGNKVLGI
CRIMLKHHHSSRVFLPLSRLLAFICQFFPDLEVRDNARIYLRMLVSIPGKKLRPMMHLGE
QPSAVPASPHPGSFFHTSSSHSEDLKSPGGISSYIFLERAIPPLVKQSWSLVLLKPSVED
NAETNKTVGIDDISVLPSHQADMENEKNFETISTSKEPFRVMDSKVAEILGVLRKYFSCI
PDYRHMPAFKVKIPCILRFDSEVFNRIWGDASSTFDSEDVDTLPAMYATTVTFSSSSYGS
IPPCRIPFLLGEPLRNKLDIVPVSRNSEEQPIYHASIVVELEPREPTPGLIDVTVKANAE
NGQIISGRLQSIPVGIEDMFLKVIIPPDIEECEMPKYMYNLFHALWEACGNSENTGGEIF
PLSGGKGAAAIHGTRSVKLLETHLDSLVMNIEQHLAPYVVGVVGNPLVNIVRGSGIIKDI
ICENDSECSVANDITALVPYSENVPLQLPYLEDEDIVEHHSSISKKKIGIFYIMIFLPPR
FHLLFQMEVHHSSTLVRIRTDHWPCLAYVDEFLEALFLT
NT seq
3360 nt
NT seq
+upstream
nt +downstream
nt
atggagaagcagcaatcggtgaagcagctaccgtcgcccaacctctccccacaggagtgg
gagtctctcttcgacgacttcggatccggctccgcctcccgacgctccaggtggcttcat
atccccctagtcgatctcgctctctactccctcctccgccgcgatttcccttctcacctc
aagccccttctccttttcttcatcgacgacttcctctcatccccatccgacgcccctccg
ccatcccaagcactgccccctcttattgacgctctacgttccctcctctcctctgttgac
ccgtccgccgccgccctgcgcgatcagtttatggtcaccaccgtttccgctgccatctca
accctcgacgccccacttgatctcgattcatctgctcttcttgagcccttagtcgagatc
ctcctcaccgtcgccaaccgccccaaccacggccatgaccgtcagtcccgcgccaccgct
tgcgagtgcctccgagaactcgaaaccgcctttccctgcctgctcaaagacgtcgctggg
catctttgggtcctcgcccaggccgagcgtacgcacgtcgcgcagagctacctcctctta
ctcgccgccgtcgtccgggacctcgtgctaagccccggacttctctcttctccgatttcc
atcctctccactgccgttcccctcgtgccctttaacgtccccggcttcctcttctccgat
cctgccgccgatcgcgactgtgagccctcagaggtgaatttgagggagatcaagcgagtc
ctcgcattcctctgggagcgaccgcaggctctcacgccttccgccacgatggagctggtc
tctatcttgaccagtatcgctagcacgctggagcagtacgtgccgactttgggggcactc
ctgaaggtgcagttctctggcctgatttactcctatcatccaatcctctgccatgttgtt
ctcatgctctactccggcttcccagatgccttttcaggggaggacgagcgcaacattgct
ctccgcctcgcccttatggctagggaagcctaccagcccctcccatttcgtcttcttgcg
ctccactggttgcttgggtcgcctcggcttggccagcgaaaagactctattgctcctcta
gcacctagattataccctgcagtttttgatgccttgtctctgaaagctaagaagcttgat
gctttagctcgcatcgcagcaaacttggatgatctagaaatgaggaagaaaggggaggag
gaaggccgaggggctctaataataaagtttttccaggatggtttggtatgtgtctctgct
tttcagtggcttcctccatggagcactgagacttcagtcacctttcgtatgcttcacaaa
tttttgattggagttgctccacatcgtggtgattgttcagaggaatgtgggtatgattat
ctcgttgattctaccattttcagtactcttcagagtaaattggtaagtttggcaatggag
catcgaggcctggttcctgtcgttgtcgcatttgttgatcggctggtgggatgtaaggct
caccaatccataggggagtgcttgctccacaaacttgatgaacatctgcttccaaaactt
gtggtcgactatcaattgacttcttacttccccatttttgagaagatagctgagaataat
actataccacctcgtggtttgttagaagtgctcacccgtcatattgctactctaatggaa
aaacatggtccagattctgccttgagtttgtggtctcgggggaataaagtattgggcatt
tgcagaataatgcttaaacatcaccacagctcaagagtttttcttccgttgtcacgtctt
ctagcatttatctgccaattcttcccggatttggaagttcgtgacaatgcaaggatctac
ctgcggatgcttgtctctatccctgggaagaaactgaggccgatgatgcatcttggtgaa
cagccctcagctgtgcctgcatctcctcatcctggctcattttttcacacttcttctagc
cactcagaggaccttaagagtccaggtggcatttcctcttatattttccttgaaagggca
attccaccacttgtcaaacagtcatggtcattagtattgctaaaaccaagtgttgaggat
aatgctgaaacaaataaaactgttggtattgatgatatcagtgttttgccttctcaccaa
gcagatatggagaatgaaaaaaactttgagacaatcagtacgagcaaggagccattcaga
gtgatggattcaaaggttgctgagattttaggagtcctaaggaagtacttctcatgcatt
cctgactaccggcacatgcctgcattcaaggttaaaataccttgcatattaagatttgat
tctgaagtgtttaaccgtatttggggagatgcttcatctacatttgattcagaagatgtg
gataccttgcctgctatgtatgcaactactgtcacattttcttcatcatcatatggttca
attccaccttgtcgcataccatttcttcttggcgaacctttgagaaataaactagatatt
gtacctgtgagtagaaattctgaggagcaaccaatttaccatgcttcaatagtagtagaa
ctggaacccagagagccaacgccaggtcttattgatgttactgtaaaggcaaatgcagaa
aatgggcaaattatctcaggaaggctccaaagtattccagttggcattgaagacatgttt
cttaaagttatcataccacctgatatcgaagagtgtgagatgcccaagtatatgtataat
ctgtttcatgcattgtgggaagcctgtggtaattctgaaaatacaggaggggagatcttt
cctcttagtggaggaaaaggggcggcagcaattcacggcacacggtctgtaaaacttctg
gaaacccatctggattctttggtcatgaatattgagcaacacttagctccatatgttgtg
ggtgttgttggtaacccactagtgaatatagtgaggggtagtgggatcattaaagatatt
atctgtgaaaatgattctgagtgttctgttgctaatgatattactgctctggtgccatat
tctgaaaatgtacctcttcagctcccgtatcttgaggatgaggatattgtagagcaccat
tcatctatcagtaaaaaaaaaattggtattttctatatcatgatattcctaccacccagg
ttccatctccttttccagatggaagtacatcattcatccaccttggtacggataagaact
gatcattggccatgtcttgcatatgttgatgaattcttggaagctctttttctgacttag
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