Zingiber officinale (ginger): 122034238
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Entry
122034238 CDS
T08725
Name
(RefSeq) luminal-binding protein 3-like
KO
K09490
endoplasmic reticulum chaperone BiP [EC:
3.6.4.10
]
Organism
zof
Zingiber officinale (ginger)
Pathway
zof03060
Protein export
zof04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
122034238
04141 Protein processing in endoplasmic reticulum
122034238
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
zof03110
]
122034238
04131 Membrane trafficking [BR:
zof04131
]
122034238
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
zof04147
]
122034238
Enzymes [BR:
zof01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.4 Acting on acid anhydrides to facilitate cellular and subcellular movement
3.6.4.10 non-chaperonin molecular chaperone ATPase
122034238
Chaperones and folding catalysts [BR:
zof03110
]
Heat shock proteins
HSP70 / DNAK
122034238
Membrane trafficking [BR:
zof04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
ER-Golgi intermediate compartment (ERGIC) proteins
122034238
Autophagy
ER-phagy
ER stress-related proteins
122034238
Exosome [BR:
zof04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
122034238
Exosomal proteins of other body fluids (saliva and urine)
122034238
Exosomal proteins of colorectal cancer cells
122034238
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HSP70
MreB_Mbl
FGGY_C
Hydantoinase_A
DDR
FtsA
Radial_spoke_3
Rep_OBD
Motif
Other DBs
NCBI-GeneID:
122034238
NCBI-ProteinID:
XP_042449330
LinkDB
All DBs
Position
11B:complement(8604353..8607935)
Genome browser
AA seq
666 aa
AA seq
DB search
MASSLRNRGSFILLGLLIAGSLFAFSIAKEEASKLGTVIGIDLGTTYSCVGVYKNGHVEI
IANDQGNRITPSWVAFTDSERLIGEAAKNQAAVNPERTIFDVKRLIGRKFEDKEVQKDMK
LVPYKIVNKDGKPYIEVTIKDGETKVFSPEEISAMVLVKMKETAEAFLGKKIKDAVVTVP
AYFNDAQRQATKDAGVIAGLNVARIINEPTAAAIAYGLDKKGGEKNILVFDLGGGTFDVS
ILTIDNGVFEVLATNGDTHLGGEDFDQRIMEYFIKLIKKKHGKDISKDNRALGKLRRESE
RAKRALSNQHQVRVEIESLYDGLDFSEPLTRARFEELNNDLFRKTMGPVKKAMEDAGLDK
HQIDEIVLVGGSTRIPKVQQLLKDYFDGKEPNKGVNPDEAVAFGAAVQGSILSGEGGDET
KDILLLDVAALTLGIETVGGVMTKLIPRNTVIPTKKSQVFTTYQDQQTTVSIQVFEGERS
LTKDCRLLGKFDLNGIPSAPRGTPQIEVTFELDANGILNVKAEDKGTGKSEKITITNEKG
RLSQEEIDRMVREAEEFAEEDKKVKDRIDARNHLETYVYNMKNTINEKDKLADKLESEEK
EKIEAALKDALEWLDDNQSAEKEDYDEKLKEVEAVCNPIISAVYQRSGGAPGGSAEDDED
DSHDEL
NT seq
2001 nt
NT seq
+upstream
nt +downstream
nt
atggcttcatcgctgcggaatcgcgggtccttcatcctgttgggactcttaatcgctgga
tctttgtttgcattctcgatcgctaaagaagaagcctccaagttgggaacagttattggg
attgatcttgggaccacctactcttgtgttggtgtctacaagaatggtcacgttgagatc
attgccaacgaccaaggaaaccgcatcacgccatcttgggtggctttcactgattctgag
agattgatcggtgaggctgcaaagaatcaggcagctgtgaatccagaaagaactatattt
gatgtcaagaggctcattggaagaaaatttgaggataaggaagttcagaaggacatgaaa
cttgtcccctacaaaatagttaacaaggatggtaaaccctatatcgaagtcacaatcaag
gatggggaaactaaagtttttagtcctgaggagataagtgcaatggttttagttaagatg
aaggagacagcagaagcttttcttggaaagaaaattaaagatgctgtggttactgttcct
gcttatttcaatgacgcccaaagacaggcaaccaaagatgctggcgtaattgctggcttg
aatgtggccagaataatcaacgaaccaacggctgctgcaattgcatatggcctggacaag
aagggtggtgagaagaacattcttgttttcgaccttggtggtgggacattcgatgttagt
atcctgacaattgataatggagtttttgaagttctggcaacaaatggtgatactcatttg
ggaggtgaggactttgatcagcgaataatggaatatttcatcaaattgatcaagaagaag
cacggaaaggatatcagcaaggacaatcgcgctctcgggaagctgaggagggagagtgaa
cgtgctaagagagctttgagtaaccagcaccaagtccgtgttgagatcgaatcactctat
gacggcttggatttctcagagccgctaactcgtgcccgtttcgaagaattgaacaacgat
ctattcaggaagaccatggggccagtgaagaaagcaatggaagatgcagggctggacaag
catcaaattgacgagattgttcttgttggtggcagcactagaattcccaaagtgcaacaa
cttctcaaggactacttcgacggcaaagagccaaacaagggggttaaccctgatgaggcg
gttgcatttggtgcagctgtgcaaggaagcattctcagtggagaaggtggtgatgaaacc
aaagatattcttctgctcgatgttgctgcccttacccttggcattgaaactgttggcgga
gtgatgactaagttgattccaaggaatacagtcatcccaaccaagaagtctcaagttttc
acaacttaccaagatcaacaaactactgtctccattcaggttttcgagggggagagaagc
ctcacaaaggactgcaggctgcttggaaaatttgatctgaacggaattccatcagcacca
agaggcacaccacagattgaagtcactttcgagcttgatgccaatggcattctgaatgtg
aaggcagaagataagggcactggcaagtcggagaagatcaccatcaccaatgaaaagggt
cgcctcagccaggaagaaattgatcgaatggttcgcgaggcagaggagtttgctgaggag
gacaagaaggtgaaggacaggattgatgcccggaaccatttggagacttatgtgtacaac
atgaagaacaccatcaatgagaaggacaagctcgccgataagcttgagagcgaagagaag
gagaaaatagaggcagccctgaaggatgccctcgagtggctcgacgacaaccagagcgct
gaaaaagaggactacgatgagaagcttaaggaggtggaagctgtttgcaaccccatcatt
tctgcagtgtatcagagatctggtggtgcgccaggaggcagtgccgaggatgatgaagat
gactcgcacgacgagctctaa
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