Zingiber officinale (ginger): 122034244
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Entry
122034244 CDS
T08725
Name
(RefSeq) ABC transporter F family member 3-like isoform X1
KO
K06158
ATP-binding cassette, subfamily F, member 3
Organism
zof
Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
zof03012
]
122034244
Translation factors [BR:
zof03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
122034244
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_tran_Xtn
PWI_ABCF3
AAA_21
SMC_N
AAA_15
AAA
NACHT
AAA_29
AAA_16
RsgA_GTPase
AAA_23
Motif
Other DBs
NCBI-GeneID:
122034244
NCBI-ProteinID:
XP_042449336
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Position
11B:complement(51264405..51305794)
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AA seq
713 aa
AA seq
DB search
MVDVASTVLHEVLGQKLQEVDAPIVSYIINVLADDDFDFGEDGDGAVEAVGELLVDSGCV
QDYEECRYVCNRLSERFGKHGLVKPKQAVRSLATPMRMFDGMDDEVPKKQPEVFDGPLLS
ERDRAKLERKKRKDERQREAQYQIHLAEMEAVKAGMPVVYVNHGGNENGPAIRDIHMENF
TVSVGGKDLIQDASVTLSFGRHYGLVGRNGTGKTSFLRHMAMHAIDGIPKNCQILHVEQE
VTGDDTTPLQCVLNSDVERLRILEEEARLLSLQRDLEYEAETGKSNGGMDKTEISNKLQQ
IYKRLEFIDADSAESRAASILAGLSFTPEMQKKPTKAFSGGWRMRIALARALFVEPDLLL
LDEPTNHLDLHAVLWLESYLVKWPKTFIVVSHAREFLNTVVTDILHLHGKQLTSYKGDYD
TFERTKVEQLQNQQKAFEANEKARAHMQAFIDKFRYNAKRASLVQSRIKALDRMGIVDAI
INDPDYKFDFPTPDDRPGPPIISFSDVSFGYPGGPILFKNLNFGIDLDSRIAMVGPNGIG
KSTILKLISGDLQPTSGTVFRSAKVRMAVFSQHHVDGLDLSSNPLLYMMRCYPGVPEQKL
RAHLGSFGVTGNLALQPMYTLSGGQKSRVAFAKITFKKPHIILLDEPSNHLDLDAVEALI
QGLVIFQGGVLMVSHDEHLIAGSVGELWAVSESRVAPFSGTFQDYKKKLKASG
NT seq
2142 nt
NT seq
+upstream
nt +downstream
nt
atggtggacgttgcgagcacggtgctgcacgaggtcttgggccagaagctgcaggaagta
gatgcgcccatcgtcagctacatcattaacgtcctcgccgacgacgatttcgacttcggt
gaggacggtgatggtgccgtcgaggccgtcggtgagctccttgttgactccggttgcgtc
caggactacgaagaatgtcgatatgtttgcaacaggctttcagaaagatttgggaaacat
ggtctcgtgaaacctaaacaagctgttcgaagtttagcaacaccgatgcggatgtttgat
ggaatggatgatgaagtaccaaagaaacaaccagaagtttttgatggtccattgctatct
gaacgtgatcgagcaaagcttgaaagaaagaaaagaaaggacgagcggcaaagagaagcc
caataccaaattcatttggcagagatggaagctgtaaaagcagggatgccagttgtctat
gtaaatcatggtggcaacgagaatggtccagctattagggacatccacatggagaacttc
acagtttcggttggtggaaaggatctcattcaagatgcttcagtaaccctgtcatttgga
aggcattatggtcttgttgggagaaatggtactggtaaaacttcttttctccgacatatg
gccatgcatgctattgatggtattccgaagaattgccagatattacacgtggaacaagaa
gttactggagatgatacaacacccttgcaatgtgtcttaaattctgatgttgaaaggctc
aggattttggaagaggaagctcgtttgctttccttgcagagggatctggagtatgaggca
gaaacaggaaagagtaatggtggcatggataaaactgaaatttcaaataagcttcagcag
atatacaaaaggcttgaattcatagatgcagattctgcagaatcacgtgcagcatcaatt
ttggcgggtcttagtttcacccctgagatgcagaaaaaacctacaaaagctttttctggt
ggatggcgcatgcgtatagctttagcacgtgccctctttgttgagcctgatctcctatta
cttgatgaaccaacgaaccatcttgatcttcatgctgtattgtggttggagtcttaccta
gtgaaatggccaaagacattcattgtggtttctcatgcgagagagtttcttaatacggtt
gttacggatattcttcatttacatgggaaacagttaacttcatacaagggagactatgat
acatttgagagaacaaaagttgaacagcttcaaaaccaacaaaaagcctttgaagcaaat
gaaaaggctagagcacatatgcaggctttcatcgataagtttcgctacaatgccaagcgg
gcatcccttgtgcagtccagaatcaaggcacttgacagaatggggattgtagatgcaatt
attaatgatcctgactacaagtttgatttccctaccccagatgacagacctggcccccca
attataagttttagtgatgtgtcatttggttatccaggagggccaatcttgtttaagaat
ttaaattttggcatagatcttgacagtcggatagcaatggtcggtcccaatggtattggc
aaatcaactatactcaaacttatatctggggatcttcaaccaacttctgggacagtattt
cgctccgcaaaggtgcgcatggctgtatttagtcaacaccatgtagatggccttgactta
tcttcaaacccactactttacatgatgagatgctatccgggcgtacctgaacagaaactg
agggcccatttgggttcctttggagttacaggcaacctagctcttcagccaatgtataca
ttgtcaggcggtcaaaagagcagggtagcatttgcaaagatcactttcaaaaaaccacac
atcattctccttgatgaaccatcaaaccatctagatttagatgctgttgaggcactcatt
cagggtcttgtgatctttcaaggaggggttttaatggtgagccacgacgaacatttaata
gccggaagtgtaggtgagctgtgggcggtctcagagagcagagtggcaccattttcaggg
actttccaggattacaaaaagaagctgaaggcttctggatga
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