Zingiber officinale (ginger): 122034376
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Entry
122034376 CDS
T08725
Name
(RefSeq) indole-3-acetic acid-amido synthetase GH3.8-like
KO
K14487
auxin responsive GH3 gene family
Organism
zof
Zingiber officinale (ginger)
Pathway
zof04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
122034376
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GFIT
Motif
Pfam:
GH3
GH3_C
GH3_M
Ldr_toxin
Motif
Other DBs
NCBI-GeneID:
122034376
NCBI-ProteinID:
XP_042449545
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Position
1A:complement(134463880..134466546)
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AA seq
609 aa
AA seq
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MAVLKAASTTAAPATTKLGPAACEKDAEKLAFIEEMTVNVDKEQERVLAEILTQNAETEY
LGRYELRGATDRATFKSKIPMVTYEDLQPEIQRIANGDRSAILSGHPISEFLTSSGTSAG
ERKLMPTIQTELDRRQLLYSLLMPVMNPYVPGLDKGKALYFLFVKSESRTPGGLPARPVL
TSYYKSDHFRSRPFDPYNVYTSPTAAILCADAFQSMYTQMLCGLIDRLAVLRVGAVFASG
LLRAIRFLQLHWRDLAADIFAGVLTPKITDPAIREAVAELLRPDPALAEFIEAECAGGDW
AGIVKRIWPNTKYLDVIVTGAMAQYIPTLEYYGGRLPMTCTMYASSECYFGLNLRPMCKP
SEVSYTIMPMMGYFEFLPHEDGSAVGGGAAPQLVDLADVEVGKHYELVVTTYAGLCRYRV
GDILQVTGFHNAAPEFRFVRRKNVLLSIESDKTDEAELQAAVERAAALLRPWGTTVVEYT
SQADTKVIPGHYVIYWELLVKEGEGGHWPPAETLQACCLEMEEAMNTVYRQSRVADGSIG
PLEIRVVGGGTFDELMDYALSRGASINQYKVPRCVTFPPIIDLLDSRVVEAHFSQSCPNW
APINNKLIN
NT seq
1830 nt
NT seq
+upstream
nt +downstream
nt
atggcggtgctgaaggcggcgagcacgacggcggcgccggcgaccaccaagctaggcccg
gcggcgtgcgagaaggacgccgagaaactcgcgttcatcgaggagatgacggtgaacgtc
gacaaggagcaagagcgggtgctggctgagatcctgacgcagaacgccgaaacagagtac
ctgggccggtacgagctccgaggcgccaccgaccgcgccaccttcaagtccaaaattccg
atggtcacgtacgaggaccttcaaccggagatccagaggatcgccaacggcgaccgctcc
gccatcctctccggccaccccatctcggagttcctaacaagttcggggacgtcggccggt
gagaggaagctgatgccgaccatccaaacggagctcgaccggcggcaactcctctacagt
cttctgatgcctgttatgaacccgtacgtgccgggattggacaaggggaaggcgctctac
ttcctgttcgtgaagtcggagagccggacgcctgggggcctgccggcgaggccggtgctc
actagctactacaagagcgaccacttccggtcgcgcccgttcgacccctacaacgtctac
acgagtcccaccgccgctatcctctgcgccgacgcattccagagcatgtacacgcagatg
ctctgcggcctcatcgatcgccttgccgtcctccgtgtcggcgctgtcttcgcctccggt
cttctccgagctatccgcttcctccagctccactggcgcgacctcgccgccgacatcttt
gccggcgtcctcactcccaaaatcaccgaccccgctatccgcgaggcggtggcagagctc
ctgaggcccgacccggcgctcgcggagttcatcgaggcggagtgtgcgggaggcgactgg
gccgggatcgtgaagcggatctggcccaataccaagtacctagacgtgattgtgacggga
gcgatggcgcagtatattccgacactggagtactacggcggcaggctgccgatgacgtgc
accatgtacgcctcgtcggagtgctattttggactcaacctccggccgatgtgcaagccc
agtgaagtttcctacaccatcatgcctatgatgggctacttcgagttccttccccacgag
gatggctccgccgtcggtggcggagcggcgccgcagctcgtcgacctggccgacgtcgag
gtcggtaagcattatgagcttgttgtcaccacctacgccggcctctgccgctatcgcgtc
ggcgacattctccaggtgacggggtttcacaacgcggcgccggagttccggttcgtgcgg
aggaagaacgtgctgctgagcatcgagtcagacaaaaccgacgaggcggaactgcaggct
gcggtggagcgggcagcggcgcttctgcggccgtggggaacgacggtggtggagtacacg
agccaggcggatacgaaggtcattccggggcattacgtcatctactgggagctgctggtg
aaggaaggggaaggggggcactggccgccggcagagacactgcaggcatgctgcctggag
atggaagaggcgatgaacacggtgtaccgacagagccgggtggcggacggctccatcggg
ccgctggaaatcagggtggtgggcggcggcacgttcgatgagctcatggactacgcgctc
tcccggggcgcctccattaaccagtacaaggtcccacgctgcgtcaccttcccacccatt
atcgatctcttggactccagagtcgtggaggcccacttcagccagagctgccccaattgg
gcccccattaacaacaagcttataaattaa
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