Zingiber officinale (ginger): 122034387
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Entry
122034387 CDS
T08725
Name
(RefSeq) protein transport protein SEC16A homolog
KO
K20353
COPII coat assembly protein SEC16
Organism
zof
Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
zof04131
]
122034387
Membrane trafficking [BR:
zof04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
122034387
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_Sec16
Sec16
Motif
Other DBs
NCBI-GeneID:
122034387
NCBI-ProteinID:
XP_042449555
LinkDB
All DBs
Position
11B:complement(56080479..56092890)
Genome browser
AA seq
1386 aa
AA seq
DB search
MESSPFHVEDQTDEDFFNNLVDDDFGGAGSHPRPNEIVRDLSNLSLDDDIGTSVEDPDDA
GLIFESNGLQQGETLQSSDSPNAPLDSSLDQVASLESSVVCASVIEQQSSLCTQHSGSKG
TSVKEIQWSAFSVSPQPFDNVGLESYSDFFAKNVDPSSDRLKYNADLNFSPVENQVENLD
AHTNSSNMQDSQLSSSSTDQNTSIDAQYWESLYPGWKYDATTGQWYQLDGYEAGTNAQNQ
HDSSRMDLQGNFNDSAEGPAFNSNLGSSDNLYLQQTSQSVLETIAEESTTATNATTTNWN
LGYKENTEFPPNMVFDPQYPGWYYDTNTQNWYSLESYTTSILTEVQNEVVTSNGFSSGNY
NVYNQVGQTEQSSKGTLDTQEFGHHWAPLSISYSQQNMLQAGGLSGKQEVQSFYNPNIAT
GTEAESSVGIQMFKPIVNHDFGSSNGIMTSHNSVNGESRYPHYSQNMPHSIQKSMPSSFL
GNQNSVDYSQHSFQDTKASYSQFAYSSNEGRSSAGRPAHALVAFGFGGKLLVVKIATSFD
ANINYGSQGTPAAVISILSLSEVVTNKLDTSSIDSSTALDYFHSLCRQNFPGPLVGGSAS
TKDINKWLDERISSYDAPVKEFQKGKLLKLLVSLLKISLQNYGKLRSPFGSDPSQEDVNG
PEMEVCNLFASSKVSSAPLGGYDSYAYCLNNIPSESQLQATAAIVQSLLVSGKRREALQS
AQEGQLWGPALVLAAQLGDKFYVDTVKKMAQHQLAFGSPLRSLCLLIAGQPADVFLPMEN
AINSLSLASPMHQAKVQPSGMLDKWEENLAIITANRTKDDELVIIHLGDCLWKDRGEVTA
AHTCYLVAEANIEPYTETARLCLIGADHLRYPRTYATPDAIQRTELYEYSKVQGNSQFIL
LPFQPYKIIYAYMLAEVGKISDSLKYCQATSKLLKSSARTSELEMWKPVLTSLEDRLRTH
QQGGYGSSLAPANIVGKLFTTFDRSIHRMIGAPPLPPVPSGNVNDKEIYSIAPKVSNSQS
TMAMASLVPSASVETMTEWSSNSNNNSKAIRHNRSVSEPDFGRTPKQDSSPDNAQSKATT
GGSRFGRIGSQLLQKTMGWVSRSHRQAKLGESNKFYYDEKLKRWVEEGADPPAEESPLPP
PPTTTPFQNGMPNYKISSAFKSDNIENDTLKPESLADKGRKADKPMTPLEHNSAIPPTPP
SQNQFSARGRMGVRSRYVDTFNKGGGGAGDGSGAFRKTFQSPAVPSANPLVGAKFFMPAE
PASTNEKPTDAAGENNKDVTTGEDPAETAIGEASFSSTPSASSSIQRFPSMNNISTRSNN
AHISRSRAASWSGNYESFNQTTTGANLGHGPTIFSPTHSKQTSLVSSSSFQQNGTSLGDD
LQEVEL
NT seq
4161 nt
NT seq
+upstream
nt +downstream
nt
atggaatcttctcctttccatgtggaagatcagactgatgaggattttttcaacaatcta
gtagatgatgattttggtggagcgggttcccatcctcgtcccaacgaaatcgtgagagat
ttatctaacctcagccttgatgatgatattggtacctctgtggaggatcctgatgatgct
ggattgattttcgaatcaaatggactgcaacaaggtgagaccttgcagtcttcggattct
ccgaatgcacctttagattcttctttagaccaggtagcctcattggaaagttcagttgtg
tgtgcttctgtgattgaacaacaaagttcattatgcactcagcattctggatctaaggga
actagtgtaaaagagattcagtggagtgccttcagtgtcagcccccagccgtttgacaat
gttgggttggaaagttattcagatttctttgccaagaatgttgatccatcatcagataga
ttgaaatataatgctgaccttaatttctcccctgtggaaaatcaagttgaaaacttggac
gcacatacaaattcctcgaatatgcaagactcccaactctcaagctcatctactgatcag
aacacaagtattgatgcacagtactgggagagtctctacccaggttggaagtatgacgca
actaccgggcaatggtatcaattagatggctatgaagctggcacgaatgcacaaaatcaa
catgattcatcaagaatggatttacaaggaaactttaatgacagtgcagaaggtcctgct
ttcaactccaatttgggtagttcagataatctataccttcagcaaacttcacagtcagtc
ttggagaccatagctgaagaaagtacaacagctacaaatgctacaactaccaattggaac
cttggttataaggagaacacagaattccctcctaatatggtatttgatcctcagtatcca
ggatggtactatgacaccaacacccaaaactggtattcccttgagtcatacactacctcg
atacttacagaagttcagaatgaggtagtaacttcaaatggcttctcaagtgggaactac
aatgtatataatcaagttggccaaactgaacaaagttctaagggaaccctggacacccaa
gagtttgggcatcactgggctcctctatcaattagctattctcagcagaacatgctacag
gctggaggtttatctggaaagcaggaggtacagagcttttacaatccgaacatagctact
ggaactgaggcagaaagtagtgtgggtattcagatgtttaaaccaattgttaatcatgat
tttggcagctctaatgggattatgacatcacacaactctgttaatggggaaagcagatat
ccacattattctcaaaatatgccacatagcattcagaaaagtatgcccagcagcttctta
ggcaatcaaaattcagttgactattcacaacattcatttcaagatacaaaagcttcttat
tcccagtttgcttattcttctaatgaaggaagatcgtcagctggacgccctgcacatgct
ttggttgcttttgggtttggagggaagctcttagttgtgaaaattgccacttcttttgat
gcaaacataaattatggaagtcagggaactccggctgctgtgatttctattcttagcttg
tctgaagttgtgacgaataaacttgacacttcgagtattgattcaagcactgcattggat
tacttccattctttgtgccgtcaaaattttccgggtcctcttgttggtgggagtgcttct
acaaaggatataaataaatggttagatgagaggatctcaagctacgatgcacctgtcaag
gagtttcagaaggggaaacttttgaagttgcttgtttcgttgctcaaaatatcattgcaa
aattatggaaaacttcgatcacctttcggctctgatccatcacaagaggatgttaatggt
ccagaaatggaagtatgcaatctttttgcatcgtcaaaagtaagcagtgctcctctggga
gggtatgattcatatgcttattgtttgaataatattccatcggagagccaacttcaggca
actgctgctatagtgcaaagccttcttgtttctggtaagaggagggaggctcttcaatct
gctcaagaaggtcaattatggggccctgctcttgttcttgctgcacagcttggagacaag
ttttatgttgacacagtaaagaagatggcacaacatcagcttgcattcgggtcaccttta
cgatcactgtgtctgcttattgctggacaacctgcagatgtgtttttaccaatggagaat
gcaattaatagcttatctttggcttcacctatgcatcaggcaaaggttcagcccagtggg
atgttggataaatgggaagagaatctagcaattataaccgcaaatagaacaaaagatgat
gaactggtaattattcatttgggagactgcctatggaaggacagaggagaggtaactgca
gctcatacttgttacttggttgctgaagcaaatattgaaccatatactgagactgcaaga
ctctgtcttattggtgctgatcacttgagatatccgaggacatatgccacacctgatgca
attcagagaacagaactttatgagtattcaaaggtgcaaggaaattctcagttcatccta
ctacctttccagccatacaagataatttatgcctacatgctggcagaagtgggaaagatt
tcagattcattgaagtactgtcaagctacttcaaaattgttgaagagttctgctcgtact
tctgagcttgaaatgtggaaaccggtgttaacctctctagaggacagattgcgtacccac
caacagggtggctatggttcaagtttggctcccgcaaatatagttggcaagttgtttact
acctttgatagatctattcatcgcatgattggtgcaccgccccttccacctgtgccatca
gggaatgtaaatgacaaagaaatctattctattgcccctaaagtatcaaacagccaatca
acaatggccatggcttctttagttccgtcagcatcagtggagacaatgactgagtggtca
agtaatagtaataataatagtaaagccattaggcacaatagaagtgtttcagagcctgat
tttggtcgaaccccaaaacaggattcaagcccagacaatgcacaaagcaaagctacaact
ggtggctcacgctttggacgcattggctcacaacttcttcagaaaaccatggggtgggtg
tccagatcccaccgccaggcaaaactgggtgaaagtaacaagttctattatgatgaaaag
ctcaagagatgggtggaggaaggagctgatcctccagcagaggagtccccccttcccccg
cctccaacaacaacgccatttcagaatggtatgccaaattacaagattagtagtgctttc
aagagtgacaacatagagaatgatactttgaaaccggaaagtcttgctgataagggcaga
aaagcagataaacctatgactccattggaacataactctgcaatcccaccaactccacct
agccaaaatcagttctcagcccgtggcagaatgggagttcggtcgaggtatgttgataca
ttcaacaagggtggcggtggtgctggtgatggcagtggtgctttcagaaaaacttttcag
tcacctgcagttccatcggcaaatccattggttggtgcaaaattctttatgcccgcagaa
cctgcaagcacaaatgaaaaaccaactgatgcagctggcgaaaacaacaaagatgtcacc
actggtgaagatccagcagaaacagcaataggagaggcatccttttcctcaacgccatca
gcttcatcatccatccagcgatttccaagcatgaacaatatttccactcgaagcaataat
gctcatatatccagatcaagagcagcatcttggagcgggaattacgagtcattcaatcag
accacgacaggtgcaaacttaggccatggtcccactatattctcacccactcacagtaag
cagactagcttggtcagcagctcatcttttcagcagaatggtacttcccttggggatgac
cttcaagaggtcgaactctag
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