Zingiber officinale (ginger): 122034500
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Entry
122034500 CDS
T08725
Name
(RefSeq) eukaryotic translation initiation factor 3 subunit E-like
KO
K03250
translation initiation factor 3 subunit E
Organism
zof
Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
zof03012
]
122034500
03051 Proteasome [BR:
zof03051
]
122034500
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
zof04147
]
122034500
Translation factors [BR:
zof03012
]
Eukaryotic type
Initiation factors
eIF-3
122034500
Proteasome [BR:
zof03051
]
Eukaryotic proteasome
Assembling factors
Other assembling factors
122034500
Exosome [BR:
zof04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
122034500
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
eIF3_N
PCI
RPN7
TPR_14
EIF3E_C
COG6_N
Motif
Other DBs
NCBI-GeneID:
122034500
NCBI-ProteinID:
XP_042449713
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Position
11B:80783365..80788849
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AA seq
440 aa
AA seq
DB search
MANHDLTSRIAPQLDRHLVFPLLEFLQERELYPNDEILKAKIQLLSHTNMVDYAMDIHKA
LYHTEDVPQAMVDRRVEVVSRLKSLEESAAPLISFLQDANLVQELRPDRQYNIQMLHDRF
QIGADQIEALYQYAKFQFECGNYSGAADYLYQYRALCTNSERSLSALWGKLAAEILMQNW
DVALEELNRLKEIIDSKSFSSPLNQLQNRIWLMHWSLFIFFNHENGRNSIIDLFFQDRYL
NAIQTNAHHLLRYLATAVIVNKRRRNMLKELVKVIQQEQHCYKDPITELLESLYVNYDFD
EAQKKLKECEQVILNDPFLGKRVGDSNFATVPLRDEFLENTRLFIFETYCRIHRCIDISV
LAEKLNLNMTYDESLAWITNLIRNSKLEAKIDAALGTVTMPVVHQNVHEQIIESMKNLNT
RTYLLAKNIVEPAQVAQASR
NT seq
1323 nt
NT seq
+upstream
nt +downstream
nt
atggcaaatcacgatctaacttctcgtatcgcacctcaactcgatcgtcaccttgtcttc
ccgctcctcgagtttttgcaggagcgggagctgtacccgaacgatgagattctcaaggcc
aagatccagcttctctcccacaccaacatggtcgactacgccatggacatccataaggcc
ctttaccatacagaagacgttccccaagccatggtggataggagggtggaggtcgtctct
aggttgaaatcccttgaagaatccgcagcgccactcatatcctttcttcaagatgctaac
ttggttcaggaattgaggcccgacagacagtataatatccaaatgcttcacgaccgcttt
cagattggcgctgatcagattgaggctctttatcagtatgcaaagttccaatttgaatgt
ggtaactattctggtgctgcggattatttgtaccaatatcgcgccctgtgcactaatagt
gagagaagtttgagtgcgttgtggggaaaacttgctgccgaaattttaatgcaaaattgg
gatgttgctctcgaggagctcaatcgtctaaaagagataattgattcaaagagtttttct
tctcctttaaatcagttgcagaacagaatctggctgatgcactggagccttttcatcttc
tttaaccatgaaaatggaagaaatagtatcattgatttattcttccaggacaggtacttg
aatgctattcagacaaatgcacatcaccttctccgatatcttgccaccgctgtcattgtc
aacaaaagaaggagaaatatgctgaaagagttggtcaaagttatccaacaagagcagcac
tgttacaaggatcccataacagaacttttagaatctttatatgttaattatgactttgat
gaagctcagaagaaactcaaggagtgtgagcaagtgattttgaatgatcccttccttggc
aaacgggtcggagattccaacttcgcaactgttccattgagggatgaattcctggaaaat
accaggctctttatttttgagacttactgccgcatccatcgatgcattgatatcagtgtg
ctcgctgaaaagttgaacttgaacatgacctatgatgaatctctggcttggataacaaat
ctcattcgcaactcgaagcttgaagccaaaatagatgctgctttggggaccgtcaccatg
cctgttgttcatcaaaatgtgcatgaacagataatagaatccatgaagaatctcaatacg
cggacttacttgttggcaaagaacatcgtggaacctgcacaagttgcacaagcttctcgt
taa
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